DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment HDAC6 and hdac7b

DIOPT Version :10

Sequence 1:NP_001259569.1 Gene:HDAC6 / 32461 FlyBaseID:FBgn0026428 Length:1179 Species:Drosophila melanogaster
Sequence 2:XP_017212138.1 Gene:hdac7b / 792596 ZFINID:ZDB-GENE-131127-113 Length:751 Species:Danio rerio


Alignment Length:667 Identity:197/667 - (29%)
Similarity:292/667 - (43%) Gaps:155/667 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   360 IIVSAGYDAALGCPEGEMEVT-------PA------------CYPHLLNPLLRLADARVAVVLEG 405
            :|.:..|.|:.|..:..::::       ||            .|||:.                 
Zfish   135 LIQTTTYSASSGKEDSPLQISIQHPVLWPAYAATAYNPQVFTLYPHIF----------------- 182

  Fly   406 GYCLDSLAEGAALTLRSLLGDPCPPLVETVPLPRAELAQALLSCIA-VHRPHWRCLQ--LQQTYD 467
                            ::.|...||:... ||.:::.|.:.:.... :|.|.:..:|  .||.:.
Zfish   183 ----------------TVTGQQWPPMPHR-PLIKSQSAPSYIQQYTHIHTPAYTLVQPMYQQQWP 230

  Fly   468 CVELQDRDKEEDLHTVLRHWIGGPPPMDRYPTRDT-----AIPLPPEKLTSNAARL--------- 518
            ....|.....|.: :|...|...|..:.|:..|.:     :...|.|.......:|         
Zfish   231 QETFQQHTLPEKV-SVGPAWPESPGDLGRFRKRTSEEVRISSQSPLESCNRQGVQLKENLEWRHK 294

  Fly   519 ----QVLRA-------ETKLS----------VPSFKVCYAYDAQMLLH-CNLNDTG---HPEQPS 558
                ||.|.       :|:||          .|:|.....|  :|:.| |:..|:.   |  :..
Zfish   295 IFHQQVSRVHSFPDTFDTRLSSHSASALDMRKPNFTTGLVY--EMMKHRCDCRDSSCGLH--EAD 355

  Fly   559 RIQHIHKMHDDYGLLKQMKQLSPRAATTDEVCLAHTRAHVNTVRRLLGREPKELHDAAGIYNSVY 623
            |:..|.....:.||..|.|.|..|:||.:|:...|:.   ..|....|.||.......|   :::
Zfish   356 RVTSIWSRLQECGLRSQCKLLKGRSATVEELLSVHSE---ELVCFFTGPEPYRSQMDIG---TMW 414

  Fly   624 LHPRTFDCATLAAGLVLQAVDSVLRGESRSGICNVRPPGHHAEQDHPHGFCIFNNVAIAAQYAIR 688
            .:||..:...:|.|.|.:....|.||:.|:|...|.||||||.:.......:||:|||||:....
Zfish   415 KNPRNSEALKMAVGSVTELALCVARGDLRNGFAVVTPPGHHASRSQTLDSIVFNSVAIAAKQLQE 479

  Fly   689 DFGLERVLIVDWDVHHGNGTQHIFESNPKVLYISLHRYEHGSFFPKGPDGNFDVVGKGAGRGFNV 753
            ...::::||||||||||:||:.||.::|.|||||||||:.|:||  ...|:...||...|||:||
Zfish   480 QLKVKKILIVDWDVHHGSGTESIFYTDPSVLYISLHRYDDGAFF--NGTGDPSRVGCDVGRGYNV 542

  Fly   754 NIPWN---KKGMGDLEYALAFQQLIMPIAYEFNPQLVLVSAGFDAAIGDP--LGGCKVTAEGYGM 813
            |:.|:   :..|||.||..||:.::||||:||:|.:||||||||||.|.|  |||.:|:.:.:|.
Zfish   543 NVAWSGGLRPPMGDAEYLAAFRTVVMPIAHEFSPNVVLVSAGFDAAEGHPAALGGYRVSPKCFGW 607

  Fly   814 LTHWLSALASGRIIVCLEGGYNVNSISYAMTMCTKTLLGDPVPTPQLGATALQKPPTVAFQSCVE 878
            ||..|..||.||:::.|||||.:.|:..|...|...|||:. |.| |....|.:.|..   :.|.
Zfish   608 LTQKLMELAEGRVVLVLEGGYELVSLCDASQACVSALLGNE-PEP-LSEVELLRSPCA---NAVC 667

  Fly   879 SLQQCLQVQRNHWR---------SLEFV-------------------------GRRLPRDPVVGE 909
            ||::.|.||..|||         ||.:|                         .|:||.:||   
Zfish   668 SLEKVLHVQSLHWRSVRSMLNTVSLSYVKAERRVSAGSEAALVLSGLNMTVPHRRQLPNEPV--- 729

  Fly   910 NNNEDFLTASLRHLNIS 926
            .::|...|.|......|
Zfish   730 EDDETHSTVSFTRRTFS 746

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HDAC6NP_001259569.1 HDAC10_HDAC6-dom1 119..457 CDD:212526 17/116 (15%)
HDAC6-dom2 538..895 CDD:212527 148/374 (40%)
zf-UBP 1007..1069 CDD:460464
hdac7bXP_017212138.1 Arginase_HDAC 329..680 CDD:450134 145/367 (40%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.