Protein Alignment HDAC6 and usp3

DIOPT Version :9

• Sequence 1: NP_001259569.1
• Gene: HDAC6 / 32461
• FlyBaseID: FBgn0026428
• Length: 1179
• Species: Drosophila melanogaster
• Sequence 2: XP_012821863.1
• Gene: usp3 / 448475
• XenbaseID: XB-GENE-962759
• Length: 522
• Species: Xenopus tropicalis
• Alignment Length: 102
• Identity: 36/102 - (35%)
• Similarity: 45/102 - (44%)
• Gaps: 23/102 - (22%)

  Fly   986 CPHLR---LLRPEEA--PRSLDSGAECSVCGSTGENWVCLSCRHVACGRYVNAHMEQHSVEEQHP 1045
            ||||.   .:.|:.|  |....|...||||.|....||||:|..|.||||||.|.::|..:.|.|
 Frog     3 CPHLTTSVCIVPDAAVFPNGCPSSWCCSVCRSNKSPWVCLTCSSVHCGRYVNGHAKKHYEDAQAP 67

  Fly  1046 L------------------AMSTADLSVWCYACSAYV 1064
            |                  .|..:..|.:||.|..:|
 Frog    68 LNCHKRQEKTDKDRMQHTVCMDCSSYSTYCYRCDDFV 104

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HDAC6	NP_001259569.1	HDAC10_HDAC6-dom1	119..457	CDD:212526
		HDAC6-dom2	538..895	CDD:212527
		zf-UBP	1007..1069	CDD:280334	28/76 (37%)
usp3	XP_012821863.1	zf-UBP	29..107	CDD:366940	28/76 (37%)
		UCH	161..510	CDD:366104

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	1	1.000