DRSC/TRiP Functional Genomics Resources

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Protein Alignment HDAC6 and HDAC1

DIOPT Version :10

Sequence 1:NP_001259569.1 Gene:HDAC6 / 32461 FlyBaseID:FBgn0026428 Length:1179 Species:Drosophila melanogaster
Sequence 2:NP_647918.2 Gene:HDAC1 / 38565 FlyBaseID:FBgn0015805 Length:521 Species:Drosophila melanogaster


Alignment Length:23 Identity:7/23 - (30%)
Similarity:14/23 - (60%) Gaps:0/23 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 NFMNSMPAGDQTIYNNMLKKYGL 102
            |.:.::|..:..:|||::..|.|
  Fly     5 NIIRALPYPETFLYNNIVHAYAL 27

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HDAC6NP_001259569.1 HDAC10_HDAC6-dom1 119..457 CDD:212526
HDAC6-dom2 538..895 CDD:212527
zf-UBP 1007..1069 CDD:460464
HDAC1NP_647918.2 Arginase_HDAC 5..372 CDD:450134 7/23 (30%)
Blue background indicates that the domain is not in the aligned region.

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