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Protein Alignment HDAC6 and Usp3
DIOPT Version :9
Sequence 1: | NP_001259569.1 |
Gene: | HDAC6 / 32461 |
FlyBaseID: | FBgn0026428 |
Length: | 1179 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001020595.2 |
Gene: | Usp3 / 363084 |
RGDID: | 1308852 |
Length: | 520 |
Species: | Rattus norvegicus |
Alignment Length: | 100 |
Identity: | 35/100 - (35%) |
Similarity: | 45/100 - (45%) |
Gaps: | 21/100 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 986 CPHLR---LLRPEEA--PRSLDSGAECSVCGSTGENWVCLSCRHVACGRYVNAHMEQH------- 1038
||||. .:.|:.| |....|...||||.|....||||:|..|.||||||.|.::|
Rat 3 CPHLSSSVCIAPDSAKFPNGSPSSWCCSVCRSNKSPWVCLTCSSVHCGRYVNGHAKKHYEDAQIP 67
Fly 1039 ---------SVEEQHPLAMSTADLSVWCYACSAYV 1064
..:.||.:.|..:..|.:||.|..:|
Rat 68 LLNHKRSEKQEKAQHTVCMDCSSYSTYCYRCDDFV 102
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG1867 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.810 |
|
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