DRSC/TRiP Functional Genomics Resources

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Protein Alignment HDAC6 and hdac10

DIOPT Version :10

Sequence 1:NP_001259569.1 Gene:HDAC6 / 32461 FlyBaseID:FBgn0026428 Length:1179 Species:Drosophila melanogaster
Sequence 2:XP_073797913.1 Gene:hdac10 / 327253 ZFINID:ZDB-GENE-030131-5464 Length:689 Species:Danio rerio


Alignment Length:823 Identity:261/823 - (31%)
Similarity:377/823 - (45%) Gaps:208/823 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 TALIYDESMSQHCCLWDKE--HYECPERFTRVLERCRELNLTERCLELPSRSATKDEILRLHTEE 168
            :|||:||.||::..||...  ..|.|||.|...|..|...|.:||..:|.|.||:.|||..|:||
Zfish    18 SALIFDEEMSRYKLLWTDPACEIEVPERLTVSYEALRTHGLAQRCKAVPVRQATEQEILLAHSEE 82

  Fly   169 HFERLKETSGIRDDERMEELSSRYDSIYIHPSTFELSLLASGSTIELVDHLVAGKAQNGMAIIRP 233
            :.|.:|:|.|:..:|.| ..|.:|:.:|.|.:.:..:.||:|:|::|||.::..:.:||||::||
Zfish    83 YLEAVKQTPGMNVEELM-AFSKKYNDVYFHQNIYHCAKLAAGATLQLVDSVMKREVRNGMALVRP 146

  Fly   234 PGHHAMKAEYNGYCFFNNVALATQHALDVHKLQRILIIDYDVHHGQGTQRFFYNDPRVVYFSIHR 298
            ||||:.::..||:|.|||||:|..:|...:.|.||||:|:|||||||.|..|..||.|:|||.||
Zfish   147 PGHHSQRSAANGFCVFNNVAIAALYAKKNYNLNRILIVDWDVHHGQGIQYCFEEDPSVLYFSWHR 211

  Fly   299 FEHGSFWPHLHESDYHAIGSGAGTGYNFNVPLNATGMTNGDYLAIFQQLLLPVALEFQPELIIVS 363
            :||.||||:|.||||.::|.|.|:|:|.|:|.|..||||.||||.|..:|||||.||.|||:|||
Zfish   212 YEHQSFWPNLPESDYSSVGKGKGSGFNINLPWNKVGMTNSDYLAAFFHVLLPVAYEFDPELVIVS 276

  Fly   364 AGYDAALGCPEGEMEVTPACYPHLLNPLLRLADARVAVVLEGGYCLDSLAEGAALTLRSLLGDPC 428
            ||:|:|:|.|||||...|..:.||.:.|:.||..::.|||||||.|.||.:....|:.||||||.
Zfish   277 AGFDSAIGDPEGEMCALPEIFAHLTHLLMPLAAGKMCVVLEGGYNLTSLGQSVCQTVHSLLGDPT 341

  Fly   429 PPLVETVPLPRAELAQALLSCIA-------VHRPHWRCLQ-LQQTYDCVELQDRDKEEDLHTVLR 485
            |.:        :.|..|..|.:.       |...:|...: |.|:      :...|...|....|
Zfish   342 PRI--------SGLGTACDSALESIQNVRNVQSSYWSGFKHLAQS------ETNPKRPRLDATNR 392

  Fly   486 HWIGGP-----PPMDRYPTRDTAIPLPPEKLTSNAARLQVLRAE---TKLSVPSFKVC-YAYDAQ 541
                ||     |..:..|.:.....:.||.|....|.::.:.|.   .:|::|  |.| ::.|..
Zfish   393 ----GPKESSEPASESNPKKTAQDIVWPEPLKRTPASVRTVVAPPPGVELTLP--KNCQHSGDVS 451

  Fly   542 MLLHCNLNDTGHPEQPSRIQHIHKMHDDYGLLKQMKQLSPRAATTDEVCLAHTRAHVNTVRRLLG 606
                   ..|....|..|.:|.|.:.|.                             |.:|.|  
Zfish   452 -------ESTAKEVQRIRDKHFHDLTDQ-----------------------------NILRSL-- 478

  Fly   607 REPKELHDAAGIYNSVYLHPRTFDCATLAAGLVLQAVDSVLRGESRSGICNVRPPGHHAEQDHPH 671
                                          |.::..:|.::|.:.   :||              
Zfish   479 ------------------------------GNIISVLDRMMRSDE---VCN-------------- 496

  Fly   672 GFCIFNNVAIAAQYAIRDF---GLERVLIVDWDVHHGNGTQHIFESNPKVLYISLHRYEHGSFFP 733
            |..:.::::::.|.|::..   ..||||:|                     |:.           
Zfish   497 GCVVVSDLSVSVQCALQHALTEPAERVLVV---------------------YVG----------- 529

  Fly   734 KGPDGNFDVVGKGAGRGFNVNI---PWNKKGMGDLEYAL--------AFQQ----LIMPIAYEFN 783
               ||.|. |....|:.|.|.|   ....|.:..|...|        .|.|    ||:|:|||||
Zfish   530 ---DGEFP-VKTNDGKVFLVQICTKETEDKCVNRLSLCLREGESLTAGFMQALLGLILPVAYEFN 590

  Fly   784 PQLVLVSAGFDAAIGDPLGGCKVTAEGYGMLTHW------LSALASGRIIVCLEGGYNVNSISYA 842
            |.|||      ..:|:       ||...|::|.|      :..||.||.:..|: ||:.:    .
Zfish   591 PALVL------GIVGE-------TAAKTGLMTVWGHMTCLIQGLAKGRTLTLLQ-GYDKD----L 637

  Fly   843 MTMCTKTLLGDPVPTPQLGATALQKPPTVAFQSCVESLQQCLQ 885
            :.:....|.|..: :| ||.....||..|   ..:|..:|.||
Zfish   638 LELTVSALSGASI-SP-LGPLRALKPEDV---EMMEKQRQRLQ 675

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HDAC6NP_001259569.1 HDAC10_HDAC6-dom1 119..457 CDD:212526 161/346 (47%)
HDAC6-dom2 538..895 CDD:212527 74/372 (20%)
zf-UBP 1007..1069 CDD:460464
hdac10XP_073797913.1 None
Blue background indicates that the domain is not in the aligned region.

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