Sequence 1: | NP_001259569.1 | Gene: | HDAC6 / 32461 | FlyBaseID: | FBgn0026428 | Length: | 1179 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001020580.1 | Gene: | Hdac1 / 297893 | RGDID: | 1309799 | Length: | 482 | Species: | Rattus norvegicus |
Alignment Length: | 468 | Identity: | 115/468 - (24%) |
---|---|---|---|
Similarity: | 200/468 - (42%) | Gaps: | 40/468 - (8%) |
- Green bases have known domain annotations that are detailed below.
Fly 533 KVCYAYDAQMLLHCNLNDTGHPEQPSRIQHIHKMHDDYGLLKQMKQLSPRAATTDEVCLAHTRAH 597
Fly 598 VNTVRRLLGREPKELHDAAGIYNSVYLHPRTFD-----CATLAAGLVLQAVDSVLRGESRSGICN 657
Fly 658 VRPPGHHAEQDHPHGFCIFNNVAIAAQYAIRDFGLERVLIVDWDVHHGNGTQHIFESNPKVLYIS 722
Fly 723 LHRYEHGSFFPKGPDGNFDVVGKGAGRGFNVNIPWNKKGMGDLEYALAFQQLIMPIAYEFNPQLV 787
Fly 788 LVSAGFDAAIGDPLGGCKVTAEGYGMLTHWLSALASGRIIVCLEGGYNVNSISYAMTMCTKTLLG 852
Fly 853 DPVPT------------PQLGATALQKPPTVAFQSCVESLQQCLQVQRNHWRSLEFVG----RRL 901
Fly 902 PRDPVVGENNNEDFLTASLRHLNISNDDATAAAGGLAGDRPDCGD---ERPSGSKPKVKVKTLSD 963
Fly 964 YLAENKEALEQSE 976 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
HDAC6 | NP_001259569.1 | HDAC10_HDAC6-dom1 | 119..457 | CDD:212526 | |
HDAC6-dom2 | 538..895 | CDD:212527 | 91/373 (24%) | ||
zf-UBP | 1007..1069 | CDD:280334 | |||
Hdac1 | NP_001020580.1 | HDAC1 | 4..374 | CDD:212534 | 95/378 (25%) |
Histone deacetylase | 9..321 | 86/323 (27%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 390..482 | 17/73 (23%) | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG0123 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |