DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dah and dyb-1

DIOPT Version :9

Sequence 1:NP_511162.1 Gene:dah / 32459 FlyBaseID:FBgn0015926 Length:649 Species:Drosophila melanogaster
Sequence 2:NP_490860.1 Gene:dyb-1 / 171715 WormBaseID:WBGene00001115 Length:590 Species:Caenorhabditis elegans


Alignment Length:654 Identity:125/654 - (19%)
Similarity:212/654 - (32%) Gaps:223/654 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 SQGGQGQKQQ------------------VDKELSTIMDDLQ-RDYGNYKYTVYRCASKFVALQKI 74
            |.||.|.::.                  |..|:..::|::: :|:.:.::..||.|.|...:|: 
 Worm     4 SNGGGGPREPSSAPSPDHHRAMHSVPPIVASEMQQLIDEMRLQDFDSIRFATYRAACKLRFIQQ- 67

  Fly    75 FHTGKIPYKLVLAILDRHNL-----SGGL--------------ELMVPPFQLTSLLHDVYFACEK 120
                    |..:.::|..|:     ..||              ||:     ||::.|::......
 Worm    68 --------KTKVHLVDIWNMIEAFRENGLNALPLHTVIKTSRAELL-----LTTVFHNLNKRLVA 119

  Fly   121 LGHFNQDANYKLDRATGLLANFFWNVYDPQRRHSISLLEIRITFILLCKLYSSDHLVGDIFGLLA 185
            ..|.:.|.:..|     ||| |....||.|....:::..|::....||.....|.| ..||..:|
 Worm   120 SQHVDTDVSISL-----LLA-FLLGAYDKQNTGRLTVFSIKVALATLCAGKLVDKL-RYIFSQIA 177

  Fly   186 DPKSQIISRYAFEQLLATLSKLLSYLGEAKAYGVHNLPLAMEQCFAR-----------------C 233
            | .:.::....|...|..:..|.:.:.||..:|...  .|:.|||.:                 |
 Worm   178 D-SNGLMDHIKFTDFLQQILSLTTAVFEAPTFGFSE--NAVNQCFHKDEKVSLNVFLDTFLSDPC 239

  Fly   234 PHGVGGLTEPQFHKLWTGAGVQTRFLIYGNLLALVKRIEDTEHLIHSNSCAGCRKEHIVGIRFRC 298
            |..:          :|               |.|:.|:....::.|...|..|:.....|.|::|
 Worm   240 PPCI----------MW---------------LPLLHRMASVSNVYHPVVCDACQVRSFTGFRYKC 279

  Fly   299 QVCRDISLCLPCFAVGFAGGRHEPGHRMCEVFVEDQP--PLRWTRHLARLCGWLVMPRKTQEEER 361
            |.|.:..||..||..|.....|...|.|.|......|  .|..:.|.:..|   :....|..:..
 Worm   280 QRCANYQLCQSCFWRGRTSQNHSNEHEMKEYSSYKSPTKQLVHSIHKSLQC---IPATSTVGDAN 341

  Fly   362 RGFCNAQESGPALGQSA----------ATP---------------------IPAET--------- 386
            ....||:..||...:.|          |||                     :|.:.         
 Worm   342 IDIFNAKIGGPVSSKPARPLNLNNIVPATPTTIRRQHAATSSADWPTSPVLLPGQASHGGVIDDE 406

  Fly   387 ----------------------RSVRSQCQEKDRTVVLQQQQQE---LCSLTGLASEASS--RLQ 424
                                  ||:.|.....:||::.|.:::.   :..:..|.|:.:|  .|.
 Worm   407 HKLIARYAAKLSGRADYPLSNGRSMNSSMVGDERTLIAQLEEENSMMVREMARLESQTTSDDGLA 471

  Fly   425 SIIDRLL-LQNAKLETQLQTVATASSSEISQFLSAHQCFLLQIIEDMRQLSHASAVTSPPPAPAA 488
            .:.||.: |:....|.|.:.                       .|.|.||.|..|..:..|.|:.
 Worm   472 GLRDRKMELEEKMFEMQQRR-----------------------RELMMQLEHLMAQLNTGPQPSG 513

  Fly   489 QVAPSAAPL------------------VSSTFLSSSTPQRQMLFDMY---APVGANLTHSINGAD 532
            .|  |:|.|                  |::.|.:.|.|...:..|:.   ..:..|::..:...|
 Worm   514 GV--SSASLSQLPFTASDQQLTGVNSTVANAFRAGSLPATSLQGDLLHAADQITTNMSDLVRQLD 576

  Fly   533 LNRS 536
            |.:|
 Worm   577 LAQS 580

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dahNP_511162.1 EF-hand_2 44..168 CDD:286194 28/143 (20%)
ZZ_dah 281..329 CDD:239085 15/47 (32%)
dyb-1NP_490860.1 EF-hand_2 38..161 CDD:286194 28/142 (20%)
EF-hand_3 165..253 CDD:286195 22/116 (19%)
ZZ_dystrophin 262..310 CDD:239074 15/47 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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