DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dah and Dytn

DIOPT Version :9

Sequence 1:NP_511162.1 Gene:dah / 32459 FlyBaseID:FBgn0015926 Length:649 Species:Drosophila melanogaster
Sequence 2:XP_003750755.3 Gene:Dytn / 100361043 RGDID:2320917 Length:648 Species:Rattus norvegicus


Alignment Length:586 Identity:117/586 - (19%)
Similarity:198/586 - (33%) Gaps:191/586 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 TVYRCASKFVALQKIFHTGKIPYKLVLAILDRHNLSGGLELMVPPFQLTSLLHDVYFACEKLG-- 122
            :|||.|.|..::|.:.....:...|:..:|...:|.   |:.|....:..|..::....::.|  
  Rat    15 SVYRTAFKLRSIQTLCQLDLMSSSLIQQVLWHEHLG---EVTVTSISVQQLFQELRELFQRTGMG 76

  Fly   123 -----HFNQDANYKLDRATGLLANFFWNVYDPQRRHSISLLEIRITFILLC------------KL 170
                 |         .||..|..:....::|......:.|..:....:.|.            :|
  Rat    77 SPVQVH---------PRAPELTLSLLMAMFDRTGSGILKLQPVAAALVALSGDSPLTKYRALFQL 132

  Fly   171 YSSDHLVGDIFGLLADPKSQI-ISRYAFEQLLATLSKLLSYLGEAKAYGVHNLPLAMEQCFARCP 234
            |:.::..||        :||. ::|.....||..|.::.:.:||:              | :.||
  Rat   133 YAENNRRGD--------ESQARMTRRVLRALLTDLQQIPTVVGES--------------C-SLCP 174

  Fly   235 HGVGGLTEPQFHKLWTGA---GV-QTRFLIYGNLLALV-------KRIEDTEHLIHSNSCAGCRK 288
                  .|...|..:.|.   |: :.:||.:.....||       .|:..:|.:.|...|:.||.
  Rat   175 ------VESAIHSCFRGVLSFGIKEEKFLSWAQSEPLVFLWLPTCYRLSASETVTHPVRCSVCRS 233

  Fly   289 EHIVGIRFRCQVCRDISLCLPCFAVGFAGGRHEPGHRMCEVFVE---------------DQPPLR 338
            ..|:|:|:||..|.|..:|..||..|.....|:..|.:.|..|:               :..|||
  Rat   234 FPIIGLRYRCLKCLDFDICELCFLSGLHKKSHQKSHTVMEDCVQMSATENTKLLFRSLRNNLPLR 298

  Fly   339 ----------W------------TRHLARLCGWLVMPR-----------KTQEEERRGFCNAQES 370
                      |            :...||||.....|:           :|...||..|. .|.|
  Rat   299 HHRAGAVGRQWLLDQLASGDSGSSHGQARLCIQYKGPKTPVYASSAGAVETAATERTRFL-CQRS 362

  Fly   371 GPALGQSAATP-----------------------IPAETRSVRSQCQEKDRTVVLQQQQQELCSL 412
            .||| |:..:|                       :..|.|.:|.|         ||:.:.:|...
  Rat   363 SPAL-QAIDSPHRHGSTVVNIKNELWRTRDSVNALHRERRFLRKQ---------LQRYKHKLQGT 417

  Fly   413 TGLASEASSRLQSIIDRLLLQNAKLETQLQTVATASSSEISQFL-----SAHQCFLLQIIEDM-- 470
            ..|....:.|.::.|..|.:....|.|:||.:    ..::...|     |:.|..:|:|:..:  
  Rat   418 YTLQENQNCRFETKIRELTINQDNLWTKLQQM----RRDLQAMLQPPRPSSPQTTVLKIVHSLPD 478

  Fly   471 ------RQLSHASAVTSPPP------------------APAAQVAP-SAAP-LVSSTFLSSSTPQ 509
                  ...||..:||...|                  |.:.:|.| |.:| ::..:....|.||
  Rat   479 DGLWRGGNSSHIKSVTRDSPEWEPLPNSAKVNRKHKCQASSGKVPPDSESPEIIFQSTSKQSHPQ 543

  Fly   510 R 510
            :
  Rat   544 K 544

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dahNP_511162.1 EF-hand_2 44..168 CDD:286194 19/114 (17%)
ZZ_dah 281..329 CDD:239085 16/47 (34%)
DytnXP_003750755.3 EFh_DMD_DYTN_DTN 36..201 CDD:352774 35/205 (17%)
EF-hand-like motif 36..76 CDD:319999 7/42 (17%)
EF-hand-like motif 82..116 CDD:319999 6/42 (14%)
EF-hand-like motif 122..165 CDD:319999 10/50 (20%)
EF-hand-like motif 176..201 CDD:319999 6/24 (25%)
ZZ 226..273 CDD:412288 16/46 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12268
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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