Protein Alignment gce and arntl1a

DIOPT Version :9

• Sequence 1: NP_001188593.1
• Gene: gce / 32457
• FlyBaseID: FBgn0261703
• Length: 959
• Species: Drosophila melanogaster
• Sequence 2: NP_571652.1
• Gene: arntl1a / 58098
• ZFINID: ZDB-GENE-000509-1
• Length: 626
• Species: Danio rerio
• Alignment Length: 614
• Identity: 138/614 - (22%)
• Similarity: 219/614 - (35%)
• Gaps: 187/614 - (30%)

  Fly   277 SGREARNRAEKNRRDKLNGSIQELSTMVPHVAESPRRVDKTAVLRFAAHALRLKHAFGNSLMQ-- 339
            :.|||.::.||.||||:|..|.||:::||......|::||..|||.|...::......|...:
Zfish    76 NAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEAN 140

  Fly   340 QRP------QITDTLMDMLDSFFLTLTC-HGHILLISASIEQHLGHCQSDLYGQSIMQITHPEDQ 397
            .:|      ::...::...|.|...:.| .|.||.:|.|:.:.|.:.|:||.|||:....||:|.
Zfish   141 YKPAFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVYKILNYTQNDLIGQSLFDYLHPKDI 205

  Fly   398 NMLKQQLIPTELENLFDAHGDSDAEGEPRQRSKAEEDAIDRK----LRED------------RRS 446
            ..:|:||              |.::..||:|      .||.|    ::.|            |||
Zfish   206 AKVKEQL--------------SSSDTAPRER------LIDAKTGLPVKTDITPGPSRLCSGARRS 250

  Fly   447 F--RVRLARAGPRSE----PTAYEVVKIDGCFRRSDEAPRGVRSNHFSSNLQLIRRTR-GRDDVI 504
            |  |::..|...:.|    |:.....|.|   |:|      ..:.|.:..|:....|: |.|:
Zfish   251 FFCRMKCNRPSVKMEDKDFPSTCSKKKAD---RKS------FCTIHSTGYLKSWPPTKMGLDE-- 304

  Fly   505 PLHTISGNDIILTGC------------ARIIRPPKIASRLIDANTLEYKTRHLIDGRIIDCDQRI 557
                  .|:....||            ..|:..|....  |.....||.:||.|||:.:..|||.
Zfish   305 ------DNEPDNEGCNLSCLVAIGRLHPHIVPQPMNGD--IRVKPTEYVSRHAIDGKFVFVDQRA 361

  Fly   558 GIVAGYMTDEVRNLSPFTFMHNDDVRWVIVALRQMYDCNSSYGESTYRLFTRNGNIIYLQSKGYL 622
            ..:..|:..|:...|.:.:.|.||:..:....||:.........:.|:...::|:.|.|:|:.:.
Zfish   362 TAILAYLPQELLGTSFYEYFHQDDIGHLAECHRQVLQMREKISTNCYKFKIKDGSFITLRSRWFS 426

  Fly   623 EIDKETNKVHSFVCVNTLLGEEEGKRRVQEMKKKFSVIINTQIPQSTIDVPASEHPALLEKAVLR 687
            .::..|.:|...|..||::
Zfish   427 FMNPWTKEVEYIVSTNTVV---------------------------------------------- 445

  Fly   688 LIQNLQKSGENGGHDDGDEDDDAQDGDDDEEDDDDDQDDGARSMSEFGDPYGSHHGRSHHGSSAL 752
                   ||                                 ||.|..||..|....|.....::
Zfish   446 -------SG---------------------------------SMLEGADPSYSQTASSPQSMDSV 470

  Fly   753 SSHGHGNAKTPPLALVPPEASSVKSAITKSISVV--NVTAAKHLRGIHASTAVKSPSSLGSCTCS 815
            .:.|.|..|. ||.:||......::...|...::  .|...:.:||       .||||.||...:
Zfish   471 LTSGDGGGKR-PLQIVPGIPGGTRAGAGKIGRMIAEEVMEIQRIRG-------SSPSSCGSSPLN 527

  Fly   816 -DSHSPCDFC-------QGAPTTDLQAVG 836
             .:..|.|.|       |...|.||.:.|
Zfish   528 ITATPPPDTCSPGGKKIQNGGTPDLPSAG 556

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
gce	NP_001188593.1	HLH	279..325	CDD:238036	22/45 (49%)
		PAS	352..>405	CDD:238075	20/53 (38%)
		PAS_11	539..646	CDD:291273	28/106 (26%)
arntl1a	NP_571652.1	HLH	78..130	CDD:278439	22/51 (43%)
		PAS	150..257	CDD:279347	34/126 (27%)
		PAS	153..212	CDD:214512	19/58 (33%)
		PAS_11	343..446	CDD:291273	28/155 (18%)
		PAS	345..440	CDD:238075	23/94 (24%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C170577647
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3561
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR23042
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	5	4.840