Protein Alignment gce and ncoa1

DIOPT Version :10

• Sequence 1: NP_511160.2
• Gene: gce / 32457
• FlyBaseID: FBgn0261703
• Length: 959
• Species: Drosophila melanogaster
• Sequence 2: XP_691744.6
• Gene: ncoa1 / 563288
• ZFINID: ZDB-GENE-041001-175
• Length: 1350
• Species: Danio rerio
• Alignment Length: 786
• Identity: 148/786 - (18%)
• Similarity: 234/786 - (29%)
• Gaps: 309/786 - (39%)

  Fly   271 MFQLSNSGR--------EARNR-----------AEKNRR-----------DKLNGSIQELSTM-- 303
            |.::|.:|.        |:|.|           .||.||           :.|:.::.:::::
Zfish     1 MLKMSAAGENALDPNILESRKRKGSPCDTSGPSVEKRRRELECRYIDELAELLSANMSDIASLNV 65

  Fly   304 -----------VPHVAESPRRVDKTAVL------------RFAAHALRLKHAFGNSLMQQRPQIT 345
                       |..:.:..||..:.|.|            ..::|.:..|.|.|
Zfish    66 KPDKCHILKSTVDQIQQIKRREQENAALMSPNDEVQQSDISSSSHGMVEKEALG----------- 119

  Fly   346 DTLMDMLDSFFLTLTCHGHILLISASIEQHLGHCQSDLYGQSIMQITHPEDQNMLKQQLIPTELE 410
            ..|::.||.||..:...|.|:.:|.::..:||:.|.:|...|:..|.|..|.|...:.|:|..|.
Zfish   120 PLLLEALDGFFFVVNREGRIVFVSENVTGYLGYTQEELMTSSVYSILHVGDHNEFVRILLPKSLV 184

  Fly   411 NLFDAHGDSDAEGEPRQRSKAEEDAIDRKLREDRRSFRVRLARAGP-------RSEPTAYEVVKI 468
            |           |.|..:.:.         |.:..:|..||.:..|       :.....||:::
Zfish   185 N-----------GVPWSQEQG---------RRNSHTFNCRLLKRPPDEVDSENQEARQQYELMQ- 228

  Fly   469 DGCFRRSDEAPRGVRSNHFSSNLQLIRRTRGRDDVIPLHTISGNDIILTGCARIIRPPKIASRLI 533
              ||..|.  |:.::..  ..:||                   :.:|...| ||.|||:     |
Zfish   229 --CFTVSQ--PKALQEE--GEDLQ-------------------SCLICIAC-RIPRPPQ-----I 262

  Fly   534 DANTLEYKTRHLIDGRIIDCDQRIGIVAGYMTDEVRNLSPFTFMHNDDVRWVIVALRQMYDCNSS 598
            ..:|..:.|:....|:||..:.......|....|            |.||..|.|..|......|
Zfish   263 PVSTESFITKQDPTGKIISIETSALRATGRPGWE------------DLVRKCIYAFFQPQGNEPS 315

  Fly   599 YGES--------------TYRLFTRNGNIIYLQSK----------------GYLEIDKETNKVHS 633
            :.:.              .||....:|..:..|::                |:..||:|.|...|
Zfish   316 HAKKLLHEVMTHGMAISPLYRFTLSDGTSLSAQTRCKFCCPQNPDVQPFIMGFHTIDREHNTASS 380

  Fly   634 FVCVNTLLGEEEGKRRVQEMKKKFSVIINTQIPQSTIDVPASEHPALLEKAVLRLIQNLQKSGEN 698
                             ||         ||....|:...|.|..|||...:.|    ::..:..|
Zfish   381 -----------------QE---------NTTPSLSSPAAPPSRSPALQPSSDL----SIHLNNTN 415

  Fly   699 G-------------GHDDGDEDDDAQDGDDDEEDDDDDQDDGARSMSEFGDPYGS-----HHGRS 745
            |             |:........:|.               ..|.|..|.|..:     ...|.
Zfish   416 GTCATPGPLTPTPPGYLTPSRVGPSQQ---------------VSSPSPLGSPLTATPTSFMSPRP 465

  Fly   746 HHGSSALSSH----GH--------------------------------------------GNAKT 762
            ..||..|:|.    ||                                            ..|:.
Zfish   466 PRGSPGLASSPRVPGHPFSPSTPSIHSPAGGLTRQQSGGDGVGFSLPSPLPPRQTPTPSSSPARQ 530

  Fly   763 PPLALVPPEASSVKSAITKSISVVNVTAAKHLRGIHASTAVKSPSSLGSCTCSDSHSPCDFCQGA 827
            ||..  |||||:.:   .||..|.|...::.|.|..|......|....:..|..|||       :
Zfish   531 PPAK--PPEASNDE---PKSNQVGNPKLSQLLDGASAPEQDSQPRPSPTSQCPASHS-------S 583

  Fly   828 PTTDLQAVGSNLKRGSTAHVETEEKLSKRRFIPSTEIEHVLHTSLDQIGRNLTQQLNVARNLREQ 892
            .|...:.:...|:..|.|....|..:.|.   |.|.....|                :||.|.::
Zfish   584 LTERHKILHRLLQDNSPADAGKEPDIKKE---PPTSPNSAL----------------IARGLGKE 629

  Fly   893 SQRYEL 898
            .|.::|
Zfish   630 PQDHQL 635

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
gce	NP_511160.2	bHLH_PAS	279..333	CDD:381397	15/108 (14%)
		PAS	352..>405	CDD:238075	16/52 (31%)
		PAS_11	537..646	CDD:464214	24/138 (17%)
ncoa1	XP_691744.6	None