Protein Alignment gce and arnt

DIOPT Version :9

• Sequence 1: NP_001188593.1
• Gene: gce / 32457
• FlyBaseID: FBgn0261703
• Length: 959
• Species: Drosophila melanogaster
• Sequence 2: XP_005157909.1
• Gene: arnt / 493634
• ZFINID: ZDB-GENE-060126-7
• Length: 747
• Species: Danio rerio
• Alignment Length: 627
• Identity: 132/627 - (21%)
• Similarity: 216/627 - (34%)
• Gaps: 144/627 - (22%)

  Fly   270 EMFQLSNSG----------REARNRAEKNRRDKLNGSIQELSTMVPHVAESPRRVDKTAVLRFAA 324
            ::|:..:.|          ||..:..|:.||:|:...|.|||.|||..:...|:.||..:||.|.
Zfish    46 KLFRCDDDGGGSNDKERFARENHSEIERRRRNKMTAYITELSDMVPACSALARKPDKLTILRMAV 110

  Fly   325 HALRLKHAFGNSLMQ--QRPQ-ITD-----TLMDMLDSFFLTLTCH-GHILLISASIEQHLGHCQ 380
            ..::.....||:...  .:|. :||     .:::..|.|...::|. |.::.:|.|:...|...|
Zfish   111 SHMKSLRGTGNTSTDGTYKPSFLTDQELKHLILEAADGFLFVVSCETGRVVYVSDSVTPVLNQAQ 175

  Fly   381 SDLYGQSIMQITHPEDQNMLKQQLIPTELEN----LFDAH-GDSDAEGEPRQRSKAEEDAIDRKL 440
            ||..|.|:....||:|...|::||..||..|    :.|.. |....||         ..|..|..
Zfish   176 SDWLGSSLYDQLHPDDVEKLREQLSTTENNNNSGRMLDMKTGTVKKEG---------GQATVRMS 231

  Fly   441 REDRRSFRVRLARAGPRSEPTA------------------------YEVVKIDGCFRRSDEAPRG 481
            ...||||..|:.......||.:                        |.||...|..|....|...
Zfish   232 MGARRSFICRMRCGVCPVEPVSLNRLNFLRTRNRNGLGSAKDGEQQYVVVHCTGYIRSWPPAGMN 296

  Fly   482 VRSNHFSSNLQLIRRTRGRDDVIPLHTISGNDIILTGCARI---IRPPKIASRLIDANTLEYKTR 543
            :......:|                   .||...|....|:   ..|...:...|.. .:|:.:|
Zfish   297 LSEEEADNN-------------------QGNRFCLVAIGRLQVTCCPSDTSINNISV-PVEFISR 341

  Fly   544 HLIDGRIIDCDQRIGIVAGYMTDEVRNLSPFTFMHNDDVRWVIVALRQMYDCNSSYGESTYRLFT 608
            |...|.....|.|.....|:.|.|:...:...|.|.:|...:..:|:|:...........:|..:
Zfish   342 HNSQGVYTFVDHRCTATVGFQTQELLGKNILDFAHPEDQGLLRDSLQQVVKLRGQVMSVMFRFQS 406

  Fly   609 RNGNIIYLQSKGYLEIDKETNKVHSFVCVNTLL--GEEEGKRRVQEMKKKFSVIINTQIPQSTID 671
            ::...:::::..:...:..:.::...:|.||.:  |..||         ..|.:.:..:.||. :
Zfish   407 KSREWVWMRTSSFTFQNPFSEEIEYIICTNTNVNRGSSEG---------SVSPLSSPSLGQSP-N 461

  Fly   672 VPASEHPALLEKAVLRLIQNLQKSGENGGHDDGDEDDDAQDGDDDEEDDDDDQDDGARSMSEFGD 736
            .|::..|..:   .:|.:|..|...:.||                              ||:..
Zfish   462 CPSTPSPGCV---TVRQLQQQQVELDGGG------------------------------MSQEA- 492

  Fly   737 PYGSHH-------------GRSHHGSSALSSH-GHGNAKTPPLALVPPEASSVKSAITKSISVVN 787
            ||.:..             ..:.|.|.|:||. ..|....||.|..|..|...::..:..:....
Zfish   493 PYENSQVTLPQVSVQTCGVVSADHSSKAVSSSVSSGQQVYPPAAAFPSPARPTETFRSPVLPQQM 557

  Fly   788 VTAAKHLRGIHASTAVKSPSSLGSCTCSDSHSPCDFCQGAPT 829
            |:.| |..|  ...|..|..|..|.....::||.....| ||
Zfish   558 VSVA-HSAG--QMLAQMSRQSTPSGVSGSNNSPIQAPSG-PT 595

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
gce	NP_001188593.1	HLH	279..325	CDD:238036	19/45 (42%)
		PAS	352..>405	CDD:238075	17/53 (32%)
		PAS_11	539..646	CDD:291273	19/108 (18%)
arnt	XP_005157909.1	HLH	65..117	CDD:238036	19/51 (37%)
		PAS	137..244	CDD:279347	32/115 (28%)
		PAS	146..252	CDD:238075	33/114 (29%)
		PAS_11	337..441	CDD:291273	18/103 (17%)
		PAS	337..433	CDD:238075	15/95 (16%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C170577643
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.840