DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gce and ARNTL

DIOPT Version :9

Sequence 1:NP_001188593.1 Gene:gce / 32457 FlyBaseID:FBgn0261703 Length:959 Species:Drosophila melanogaster
Sequence 2:XP_016873227.1 Gene:ARNTL / 406 HGNCID:701 Length:674 Species:Homo sapiens


Alignment Length:672 Identity:145/672 - (21%)
Similarity:239/672 - (35%) Gaps:197/672 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   262 PHPHETMMEMFQLSNSGREARNRAEKNRRDKLNGSIQELSTMVPHVAESPRRVDKTAVLRFAAHA 326
            ||......|......:.|||.::.||.||||:|..|.||:::||......|::||..|||.|...
Human   100 PHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQH 164

  Fly   327 LRLKHAFGNSLMQQRPQIT----DTLMDML----DSFFLTLTC-HGHILLISASIEQHLGHCQSD 382
            ::......|...:...:.|    |.|..::    |.|...:.| .|.||.:|.|:.:.|.:.|:|
Human   165 MKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQND 229

  Fly   383 LYGQSIMQITHPEDQNMLKQQLIPTELENLFDAHGDSDAEGEPRQRSKAEEDAIDRK----LRED 443
            |.|||:....||:|...:|:||              |.::..||:|      .||.|    ::.|
Human   230 LIGQSLFDYLHPKDIAKVKEQL--------------SSSDTAPRER------LIDAKTGLPVKTD 274

  Fly   444 ------------RRSFRVRLARAGPRSEPTAYEVVKIDG------CFRRSDEAPRGVRSNHFSSN 490
                        ||||..|:....|.        ||::.      |.::..:. :...:.|.:..
Human   275 ITPGPSRLCSGARRSFFCRMKCNRPS--------VKVEDKDFPSTCSKKKADR-KSFCTIHSTGY 330

  Fly   491 LQLIRRTR-GRDDVIPLHTISGNDIILTGC------------ARIIRPPKIASRLIDANTLEYKT 542
            |:....|: |.|:        .|:....||            :.::  |:..:..|...::||.:
Human   331 LKSWPPTKMGLDE--------DNEPDNEGCNLSCLVAIGRLHSHVV--PQPVNGEIRVKSMEYVS 385

  Fly   543 RHLIDGRIIDCDQRIGIVAGYMTDEVRNLSPFTFMHNDDVRWVIVALRQMYDCNSSYGESTYRLF 607
            ||.|||:.:..|||...:..|:..|:...|.:.:.|.||:..:....||:.........:.|:..
Human   386 RHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFK 450

  Fly   608 TRNGNIIYLQSKGYLEIDKETNKVHSFVCVNTLLGEEEGKRRVQEMKKKFSVIINT------QIP 666
            .::|:.|.|:|:.:..::..|.:|...|..||:                  |:.|.      ..|
Human   451 IKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTV------------------VLANVLEGGDPTFP 497

  Fly   667 QSTIDVPASEHPALLEKAVLRLIQNLQKSGENGGHDDGDEDDDAQDGDDDEEDDDDDQDDGARSM 731
            |.|    ||.|.          :.::..|||:.                                
Human   498 QLT----ASPHS----------MDSMLPSGEDS-------------------------------- 516

  Fly   732 SEFGDPYGSHHGRSHHGSSALSSHGHGNAKTPPLALVPPEASSVKSAITKSISVVNVTAAKHLRG 796
            ...|.|..:|                     |.:..:|....:....|.:.|       |:.:..
Human   517 FVVGGPKRTH---------------------PTVPGIPGGTRAGAGKIGRMI-------AEEIME 553

  Fly   797 IHASTAVKSPSSLGSCTCSDSHSPCDFCQGAPTTDLQAVGSNLKRGSTAHVETEEKLS----KRR 857
            ||.... .||||.||       ||.:.....|.......|..:..|.|..:.:...||    :..
Human   554 IHRIRG-SSPSSCGS-------SPLNITSTPPPDASSPGGKKILNGGTPDIPSSGLLSGQAQENP 610

  Fly   858 FIPSTEIEHVL----HTSLDQI 875
            ..|.::...:|    |..:|.|
Human   611 GYPYSDSSSILGENPHIGIDMI 632

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gceNP_001188593.1 HLH 279..325 CDD:238036 22/45 (49%)
PAS 352..>405 CDD:238075 20/57 (35%)
PAS_11 539..646 CDD:291273 28/106 (26%)
ARNTLXP_016873227.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165144521
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3561
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23042
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.840

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