Protein Alignment gce and Arntl2

DIOPT Version :9

• Sequence 1: NP_001188593.1
• Gene: gce / 32457
• FlyBaseID: FBgn0261703
• Length: 959
• Species: Drosophila melanogaster
• Sequence 2: XP_038963872.1
• Gene: Arntl2 / 362464
• RGDID: 620230
• Length: 625
• Species: Rattus norvegicus
• Alignment Length: 478
• Identity: 116/478 - (24%)
• Similarity: 196/478 - (41%)
• Gaps: 84/478 - (17%)

  Fly   276 NSGREARNRAEKNRRDKLNGSIQELSTMVPHVAESPRRVDKTAVLRFAAHALRLKHAFGN----- 335
            |..|||.::.||.||||:|..|.:||:|:|....:..::||.::||.|...||.:.....
  Rat    85 NGIREAHSQTEKRRRDKMNHLIWKLSSMIPPHIPTAHKLDKLSILRRAVQYLRSQRGMTEFYLGE 149

  Fly   336 ----SLMQQRPQITDTLMDMLDSFFLTLTCH-GHILLISASIEQHLGHCQSDLYGQSIMQITHPE 395
                |.:|.: :::..::...:.|.|.:.|. |.||.:|.|:.:.|.:.|:.|.||::.....|:
  Rat   150 NAKPSFIQDK-ELSHLILKAAEGFLLVVGCEGGRILFVSKSVSKTLHYDQASLMGQNLFDFLQPK 213

  Fly   396 DQNMLKQQL----------IPTELENLFDA------HGDSDAEGEPRQRSKAEEDAIDRKLREDR 444
            |...:|:||          |.|:.|....:      |..|.. |..|..|.:            |
  Rat   214 DVAKVKEQLSCDVSLREKPIGTKSEFFLQSLASPQVHSHSHI-GRSRVHSGS------------R 265

  Fly   445 RSFRVRLARAGPRSEPT--AYEVVKIDGCFRRSDEAPRGVRSNHFSSNLQ-----LIRRTR---- 498
            |||..|:     :|..|  ..|..:...|.::.|:  |...:.|.:..|:     ::...:
  Rat   266 RSFFFRM-----KSSCTVPVKEEQRCSSCSKKKDQ--RKFHTIHCTGYLRSWPPNVVGTEKEMGS 323

  Fly   499 GRDDVIPLHTISGNDIILTGCARI---IRPPKIASRLIDANTLEYKTRHLIDGRIIDCDQRIGIV 560
            |:|        ||....|....|:   ..|||  :..|:....|:.||..::|:.:..|||...:
  Rat   324 GKD--------SGPLTCLVAMGRLQPYTVPPK--NGKINVRPAEFITRFAMNGKFVYVDQRATAI 378

  Fly   561 AGYMTDEVRNLSPFTFMHNDDVRWVIVALRQMYDCNSSYGESTYRLFTRNGNIIYLQSKGYLEID 625
            .||:..|:...|.:.:.|.||...:....:.:..........:|:...::|:.:.|:||.:...:
  Rat   379 LGYLPQELLGTSCYEYFHQDDHSNLSDKHKAVLQSKEKILTDSYKFRVKDGSFVTLKSKWFSFTN 443

  Fly   626 KETNKVHSFVCVNTL-LGEEEGKRRVQEMKKKFSVIINTQIPQSTIDVPASEHPALLEKA----- 684
            ..|.|:...|.|||| ||..|....|.:.:...|  ......|..:.||......||...
  Rat   444 PWTKKLEYIVSVNTLVLGRSETAVSVPQCRSSQS--SEDSFRQPCVSVPGISTGTLLGAGSIGTD 506

  Fly   685 VLRLIQNLQKSGENGGHDDGDED 707
            :...:.:||:|     |....||
  Rat   507 IANEVLSLQRS-----HSSSPED 524

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
gce	NP_001188593.1	HLH	279..325	CDD:238036	20/45 (44%)
		PAS	352..>405	CDD:238075	18/63 (29%)
		PAS_11	539..646	CDD:291273	28/107 (26%)
Arntl2	XP_038963872.1	bHLH_SF	87..146	CDD:412148	22/58 (38%)
		PAS	171..268	CDD:238075	28/109 (26%)
		PAS_11	357..464	CDD:405306	28/106 (26%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C166338232
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR23042
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	4	3.940