Protein Alignment gce and npas2

DIOPT Version :9

• Sequence 1: NP_001188593.1
• Gene: gce / 32457
• FlyBaseID: FBgn0261703
• Length: 959
• Species: Drosophila melanogaster
• Sequence 2: NP_840084.1
• Gene: npas2 / 352934
• ZFINID: ZDB-GENE-030408-3
• Length: 845
• Species: Danio rerio
• Alignment Length: 715
• Identity: 148/715 - (20%)
• Similarity: 269/715 - (37%)
• Gaps: 172/715 - (24%)

  Fly   266 ETMMEMFQLSNSGREARNRAEKNRRDKLNGSIQELSTMVPHVAESPRRVDKTAVLRFAAHALR-- 328
            :.:|:..:...:.|.:||::||.|||:.|..|:||.||:..... ||::||:.:|:.....|:
Zfish    31 DDLMDEDEKDRAKRASRNKSEKKRRDQFNVLIKELCTMLQGQGH-PRKMDKSTILQRTIDFLQKQ 94

  Fly   329 -----------LKHAFGNSLMQQRPQITDTLMDMLDSFFLTLTCHGHILLISASIEQHLGHCQSD 382
                       ::..:..|.:... :.|..:::.||.|.:.||..|:|:.:|.|:...:||..||
Zfish    95 KEITAQTESCEVRQDWKPSFLSNE-EFTQLMLEALDGFLIALTTDGNIIYVSDSVSSLIGHLPSD 158

  Fly   383 LYGQSIMQI----THPEDQNMLKQQLIPTELENLFDAHGDSDAEGEPRQRSKAEEDAIDRKLRED 443
            :..|:|:..    .|.:...:|...::.||...:                     |.::.  .|.
Zfish   159 MVDQNILNFLPEREHADVYKLLSSHMLLTESSTV---------------------DLLNS--NET 200

  Fly   444 RRSFRVRLARAG--PRSEPTAYEVVKIDGCFRRSDEAPRGVRSNHFSSNLQLIRRTRGRDDVIP- 505
            ...|...:||..  |: ||..||.||..|.|:             |.:|:.| ....|.|...|
Zfish   201 HVEFCCHIARGNIDPK-EPPTYEYVKFVGDFK-------------FHNNVPL-SSCNGYDLAFPR 250

  Fly   506 -LHTISGNDIILTGCARIIRPPKIASRLIDANTL--EYKTRHLIDGRIIDCDQRIGIVAGYMTDE 567
             |.:.....:.|....| :..|:....|.:...:  |:.:||.::.:.:..|.|...:.||:..|
Zfish   251 TLQSSIEEQVCLVATVR-LATPQFLKDLCNVEDVCDEFTSRHSLEWKFLFLDHRASPIIGYLPFE 314

  Fly   568 VRNLSPFTFMHNDDVRWVIVALRQMYDCNSSYGEST-YRLFTRNGNIIYLQSKGYLEIDKETNKV 631
            |...|.:.:.|.||:..:....:|:..|..  |:|. ||..|:....|:||:..|:...:..:|.
Zfish   315 VLGTSGYDYYHVDDLELIAQCHKQLMQCGK--GKSCYYRFLTKGQQWIWLQTHYYITYHQWNSKP 377

  Fly   632 HSFVCVNTLLGEEEGKRRVQEMKKKFSVIINTQIPQSTIDVPASEHPALLEKAVLRLIQNLQKSG 696
            ...||.::::...|.:   .|.:::|.      :.:|:.|:..|....  ::..|.:...|:.:
Zfish   378 EFIVCTHSVVSYAEVR---AERRREFG------LEESSSDMATSSIKG--QEVFLDMCPPLEAT- 430

  Fly   697 ENGGHDDGDEDDDAQDGDDDEEDDDDDQDDGARSMSEFGDPYGSHHGRSHHGSSALSSHGHGNAK 761
                                     .|:.:.|||:|.......||...|...|::...:......
Zfish   431 -------------------------RDRINSARSVSSQSSRKSSHTALSDSASNSSVRYTEACTS 470

  Fly   762 TPPLALVPPEASSVKSAITKSISVVNVTAAKHLRGIHASTAVKSPSSLGSCTCSDSHSPCDFCQG 826
            :...|.:.||.||.:         :..|..|.|  |...::.:.||...||:   .||
Zfish   471 SRQSASIGPEKSSNR---------MTHTGTKTL--IQRQSSSEPPSLSPSCS---QHS------- 514

  Fly   827 APTTDLQAVGSNLKRGSTAHVETEEKLSKRRFIPSTEIEHVLHTSLDQIGRNLTQQLNVARNLRE 891
            |.|..|.:...                      |...:.|.|...|::..|.|...:
Zfish   515 AMTQSLYSFQQ----------------------PQLGVMHQLKEQLEERTRILQADI-------- 549

  Fly   892 QSQRYELPHANQRFDEIMQEHQKQSELYVNIKSEYEVQLQHKASTRKSSDSDRNQEQPPPPLQED 956
            ::|:.||....::    :|....|..|...|:.|:             :.|...|:.|..|.|::
Zfish   550 KTQQQELHDIKEK----LQLANLQMLLQQPIQGEF-------------AGSGPQQQGPGRPAQQN 597

  Fly   957  956
            Zfish   598  597

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
gce	NP_001188593.1	HLH	279..325	CDD:238036	19/45 (42%)
		PAS	352..>405	CDD:238075	17/56 (30%)
		PAS_11	539..646	CDD:291273	27/107 (25%)
npas2	NP_840084.1	HLH	40..96	CDD:238036	20/56 (36%)
		PAS	119..>203	CDD:307226	22/106 (21%)
		PAS_3	285..388	CDD:330807	27/104 (26%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C170577652
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3561
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	3	2.740