Protein Alignment gce and aha-1

DIOPT Version :10

• Sequence 1: NP_511160.2
• Gene: gce / 32457
• FlyBaseID: FBgn0261703
• Length: 959
• Species: Drosophila melanogaster
• Sequence 2: NP_001251327.1
• Gene: aha-1 / 172889
• WormBaseID: WBGene00000095
• Length: 453
• Species: Caenorhabditis elegans
• Alignment Length: 323
• Identity: 70/323 - (21%)
• Similarity: 127/323 - (39%)
• Gaps: 82/323 - (25%)

  Fly   279 REARNRAEKNRRDKLNGSIQELSTMVPHVAESPRRVDKTAVLRFA--------AHALRLKHAFGN 335
            ||..:..|:.||:|:...|.||:.|||..|...|:.||..:||.|        .|..:.:.::..
 Worm    46 RENHSEIERRRRNKMTHYINELAEMVPQCASLGRKPDKLTILRMAVSHMKGIRGHTAQDETSYKP 110

  Fly   336 SLMQQRPQITDTLMDMLDSFFLTLTCH-GHILLISASIEQHLGHCQSDLYGQSIMQITHPEDQNM 399
            |.:..: ::...:::..:.|...:.|. |.:|.::.||...|...|.|...:::.::.||:||:.
 Worm   111 SFLTDQ-ELKHLILEAANGFLFVVCCQTGKVLYVADSITPVLNLKQEDWLQRNLNELIHPDDQDK 174

  Fly   400 LKQQLIPTE--LENLFDAHGDSDAEGEPRQRSKAEEDAIDRKLREDRRSFRVRLARAGPRSEPTA 462
            ::.||..:|  :..:.|.          :..|...|.|..|.....||.|..|: |.|.
 Worm   175 IRDQLCGSEVSVNKVLDL----------KSGSVKREGASTRVHMSCRRGFICRM-RVGA------ 222

  Fly   463 YEVVKIDGCFRRSDEAPRGVRSNHFSSNLQLIRRTRGRDDVIPLHTISGNDIILTGCARIIR--P 525
                                        |:.:.|.|.|.   ||...:|.:.::..|...|:  |
 Worm   223 ----------------------------LEPLHRLRNRR---PLFQHAGQNYVVMHCTGYIKNAP 256

  Fly   526 P-----------------KIASRLIDA---NTLEYKTRHLIDGRIIDCDQRIGIVAGYMTDEV 568
            |                 ::||..:.|   :|.::..|...||::...|.|:..:.|..:|::
 Worm   257 PQGINAPASSCLVAIARLQVASMPVCADPTSTNQFSVRVSEDGKMTFIDARVSDLIGLSSDQL 319

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
gce	NP_511160.2	bHLH_PAS	279..333	CDD:381397	20/61 (33%)
		PAS	352..>405	CDD:238075	14/53 (26%)
		PAS_11	537..646	CDD:464214	8/32 (25%)
aha-1	NP_001251327.1	bHLH-PAS_ARNT	41..105	CDD:381517	20/58 (34%)
		PAS	120..179	CDD:214512	13/58 (22%)
		PAS_11	288..393	CDD:464214	8/32 (25%)