Protein Alignment gce and Arntl

DIOPT Version :9

• Sequence 1: NP_001188593.1
• Gene: gce / 32457
• FlyBaseID: FBgn0261703
• Length: 959
• Species: Drosophila melanogaster
• Sequence 2: XP_006507308.1
• Gene: Arntl / 11865
• MGIID: 1096381
• Length: 638
• Species: Mus musculus
• Alignment Length: 429
• Identity: 106/429 - (24%)
• Similarity: 172/429 - (40%)
• Gaps: 93/429 - (21%)

  Fly   262 PHPHETMMEMFQLSNSGREARNRAEKNRRDKLNGSIQELSTMVPHVAESPRRVDKTAVLRFAAHA 326
            ||......|......:.|||.::.||.||||:|..|.||:::||......|::||..|||.|...
Mouse    64 PHGRLEYAEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQH 128

  Fly   327 LRLKHAFGNSLMQQRPQIT----DTLMDML----DSFFLTLTC-HGHILLISASIEQHLGHCQSD 382
            ::......|...:...:.|    |.|..::    |.|...:.| .|.||.:|.|:.:.|.:.|:|
Mouse   129 MKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQND 193

  Fly   383 LYGQSIMQITHPEDQNMLKQQLIPTELENLFDAHGDSDAEGEPRQRSKAEEDAIDRK----LRED 443
            |.|||:....||:|...:|:||              |.::..||:|      .||.|    ::.|
Mouse   194 LIGQSLFDYLHPKDIAKVKEQL--------------SSSDTAPRER------LIDAKTGLPVKTD 238

  Fly   444 ------------RRSFRVRLARAGPRSEPTAYEVVKIDGCFRRSDEAPRGVRSNHFSSNLQLIRR 496
                        ||||..|:.                  |.|.|.:    |....|:|...  ::
Mouse   239 ITPGPSRLCSGARRSFFCRMK------------------CNRPSVK----VEDKDFASTCS--KK 279

  Fly   497 TRGRDDVIPLH----------TISGND--------------IILTGCARIIRPPKIASRLIDANT 537
            ...|.....:|          |..|.|              ::..|.......|:.|:..|...:
Mouse   280 KADRKSFCTIHSTGYLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHSHMVPQPANGEIRVKS 344

  Fly   538 LEYKTRHLIDGRIIDCDQRIGIVAGYMTDEVRNLSPFTFMHNDDVRWVIVALRQMYDCNSSYGES 602
            :||.:||.|||:.:..|||...:..|:..|:...|.:.:.|.||:..:....||:.........:
Mouse   345 MEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTN 409

  Fly   603 TYRLFTRNGNIIYLQSKGYLEIDKETNKVHSFVCVNTLL 641
            .|:...::|:.|.|:|:.:..::..|.:|...|..||::
Mouse   410 CYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVV 448

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
gce	NP_001188593.1	HLH	279..325	CDD:238036	22/45 (49%)
		PAS	352..>405	CDD:238075	20/57 (35%)
		PAS_11	539..646	CDD:291273	28/103 (27%)
Arntl	XP_006507308.1	bHLH-PAS_ARNTL_PASD3	74..137	CDD:381444	22/62 (35%)
		PAS	153..260	CDD:366402	35/144 (24%)
		PAS_11	346..448	CDD:373151	28/101 (28%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C167834645
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3561
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR23042
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	5	4.840