DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5877 and AT3G17712

DIOPT Version :9

Sequence 1:NP_001259563.2 Gene:CG5877 / 32455 FlyBaseID:FBgn0030625 Length:984 Species:Drosophila melanogaster
Sequence 2:NP_001189921.1 Gene:AT3G17712 / 7922332 AraportID:AT3G17712 Length:856 Species:Arabidopsis thaliana


Alignment Length:457 Identity:86/457 - (18%)
Similarity:147/457 - (32%) Gaps:147/457 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LFPAY--GAGRTSAAGSAKQ------------------TTKPGEEEPSTGGNWKKNESYIKKHVN 47
            |||.:  .|...||..:|.|                  :|.|...|...|.: :..|.....::.
plant    49 LFPVFPTSANSISAISNAPQWLRNASFTTDLSVINAAASTAPSSSEVEAGDD-EDEEGGADGNIG 112

  Fly    48 IATQG-----PESDSSSSTEDSEDEADKRKQDDVTKTKNVHRGKTLEFDSSDGFYVDKV------ 101
            :|.|.     .|.:.|.   :|:|:..|||::...|.|:.:.........||.:|...|      
plant   113 LANQARVYNLVEEEGSL---ESDDDKVKRKREKKKKRKSDNASDESRSRKSDEYYSKPVKDYYLD 174

  Fly   102 -----GNSSYRNIKTLKKPARPRYK----------------TRMKRLG-----------DGK--- 131
                 .|.:|.:|..:..   ||||                .|.:|..           :|:   
plant   175 TRPDPDNLAYGSIYRMNV---PRYKLDNSQRVPGSGSLRFYLRNRRSSMLDTEIDIDSLEGRAKS 236

  Fly   132 -----YNPHDFSRAHSKFSLKRSRYVREKLIADA--------------PSEDEVSRL-------- 169
                 |..|.....:..|  ||.|........|:              |..||...|        
plant   237 DTRYWYAKHAAMERNKNF--KRIRLSAASEAVDSSFDNFIPLEEDVTVPESDEEDVLSKDSMIGA 299

  Fly   170 ---QEQLIRTKV---LVQQEPEVLDHWLQL----HRLLNLNLDKANRLAVAEQQIHSLETAMEHH 224
               .|.|.:|:.   :.::.|.....||..    .::.::...|..||...|::|..||.|.|.:
plant   300 SWEDEVLNKTREFNRVTRERPHDAKAWLAFADFQDKVSSMQSQKGVRLQTLEKKISILEKAFELN 364

  Fly   225 PSNQQILRLYTHVANATYQANEVARRFEKMLKRNPFQYTLWSNLIMITQGDMACCNVSAVLRIYE 289
            |.::::|........:...|:.:.|.|.:.                         .||.|.|:|.
plant   365 PDSEELLLALLKAYRSRDNADVLIREFSRF-------------------------KVSEVRRLYS 404

  Fly   290 Y---------SMRRMHVGHNDEITRRFIIKETDVIMLKLFHNCLLFLRQSGHTNWMFALIRLSME 345
            |         |.|...|....|......|:: :::::.:..:...|..|:|:.....||::..:|
plant   405 YAIQALSSACSKRHRQVDTTSEPLDSAAIQQ-ELVLVDMLVSLCRFEWQAGYQELATALLQAEVE 468

  Fly   346 LN 347
            .:
plant   469 FS 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5877NP_001259563.2 NRDE-2 180..>348 CDD:285605 34/181 (19%)
AT3G17712NP_001189921.1 NRDE-2 311..677 CDD:285605 34/186 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1972
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55686
OrthoDB 1 1.010 - - D833360at2759
OrthoFinder 1 1.000 - - FOG0003950
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_104167
Panther 1 1.100 - - O PTHR13471
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
87.880

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