DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5877 and nrde2

DIOPT Version :9

Sequence 1:NP_001259563.2 Gene:CG5877 / 32455 FlyBaseID:FBgn0030625 Length:984 Species:Drosophila melanogaster
Sequence 2:XP_031746460.1 Gene:nrde2 / 780328 XenbaseID:XB-GENE-960400 Length:1146 Species:Xenopus tropicalis


Alignment Length:1205 Identity:229/1205 - (19%)
Similarity:418/1205 - (34%) Gaps:368/1205 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 AGSAKQTTKPGEEEPSTGGNWKKNESYIKKHVNIATQGPESDSSSSTEDSEDEADKRKQDDVTKT 79
            :||..|.||..:::       ||.:...|||..  .:|.:.|...:|.||:...:.|:..:....
 Frog    69 SGSDSQATKKKKKK-------KKKKKQKKKHKQ--KRGYDEDEEGNTSDSDSRPETRESKETESV 124

  Fly    80 KNVH------RGKTLEFDSSDGFYVDKVGNSSYRNIKTLKK--PARPRYKT-------RMKRLGD 129
            .::.      |..|.......|.::|:|.:.:....:..||  ||...||:       |.||.|:
 Frog   125 ASISIFSFSARQDTCVVLPGRGIWLDEVQSVTEETYRIDKKSDPANWEYKSLYQGDIARYKRKGN 189

  Fly   130 G--KYNPH------------------------------------DFSRAHSKFSLKRSRYV---- 152
            .  ..||.                                    ||.......|||...::    
 Frog   190 SCLGINPKKQQINWQDALSEKKEARRKNERYFTKSTMQLLSANADFVSCKESASLKSGEFIPVLD 254

  Fly   153 --REKLIADA-------------------------PSEDEVSRL-QEQLIRTKV-----LVQQEP 184
              ::.:|:.:                         |..|.:..: ::..|..||     .:::.|
 Frog   255 PDKDGVISSSGPISWVNPLGVYDSSTALWLEGKGGPEYDTIQPVPRDNNILAKVEDYNKRIRECP 319

  Fly   185 EVLDHWLQL-----------------------HRL-LNLNLDKANRLAVAEQQIHSLETAMEHHP 225
            ..:..|::.                       ||. :.|.|:|  :||:       ||.|:|.:|
 Frog   320 NDIQLWMEFVSFQDELVKQPSMYSTSKGELDGHRTSVKLLLEK--KLAI-------LERAIESNP 375

  Fly   226 SNQQILRLYTHVANATYQANEVARRFEKMLKRNPFQYTLWSNLIMITQGDMACCNVSAVLRIYEY 290
            .:.::......:....::|..:.:.::|::..:|....||...::..||..:..:||.:..||..
 Frog   376 GSTELKLAKLKLCEEFWEAPTLLKEWQKLIFLHPNDSQLWQKYLLFCQGQFSTFSVSKMNSIYGK 440

  Fly   291 SMRRMHVGHNDEITRRFIIKETDVIMLKLFHNCLLFLRQSGHTNWMFALIRLSMELNF------- 348
            .:..:....:..:.....:.:|:..|..:|.....||||:|||..:.:|.:...:..|       
 Frog   441 CLSTLAAVQDGIMLSHNALPDTESNMYDIFLQQCQFLRQAGHTEKVISLFQALTDFTFYKPDSVK 505

  Fly   349 ------------PYLTFECLQAHAGREKALIGF---------------------------EEVVL 374
                        |:  ::..:...| ||...|:                           ||:.:
 Frog   506 DMTTKEQVDFFEPF--WDSGEPRFG-EKGAKGWSSWMRQQERGGWIIINNLVEDDEDEADEELSI 567

  Fly   375 R-SGMPMPEIWTRVEQLRQAYCFLPLK-DKLASSTNVFKNKMNAERYFCSDKLVPYVHALKSQNN 437
            | ...|..:||..||..|:|..:||.: |.....|.  ....:.||....|.:.|.:..:.|...
 Frog   568 RGKNCPRYKIWLDVECSREARHWLPWRPDTTKKQTE--DECEDPERQVLFDDIGPSMFKITSPQM 630

  Fly   438 RLHLVLVVVQLMKLP------------LIRSASLADKLNPCIEDFGESEAIEMLFAAIVDRHSYA 490
            :..|....:..:.:|            .:...|:.|.::|          .|||..:        
 Frog   631 QFQLFKSFLHFLGVPCGANISPRCFYLALDETSIFDHVSP----------YEMLLNS-------- 677

  Fly   491 VASLQYQFDAAMIDLAREMSVTPSYMPHLVGHKLYADT-VSNMLLKCVEVFIGEESKRRLLLILY 554
                 ::...:.|.....:. |.|.....:|:....:| :.|:....:.:..|||  :|.:.:.:
 Frog   678 -----FEIPLSGIGTVGHLD-TLSRSRQQIGYFKEGETFIQNIFQSALSLLHGEE--KRNISVWW 734

  Fly   555 LRFQ--KLLIVLH-------KSMGKLTKKFFKDKRTRMRKLINLTENRNVISFYTEQALCEIEAK 610
            |:::  |::..|.       :|.||.:|:..|       .|:....|||.::.:.|.||.|    
 Frog   735 LQYEISKVVWCLQANNKKKLRSQGKRSKRLAK-------SLLKEASNRNSLALWKEYALLE---- 788

  Fly   611 HYRLG--------FSIISRIITKK--SEESSCISCVDTMHLYLVCAELHIHRGRI---------S 656
             :.||        |.....:...|  .::..|..|       |:.:||   .|::         |
 Frog   789 -WLLGNIDDARKVFDTAISLAGSKGLKDQELCSLC-------LLYSEL---EGKLLDNPEENAGS 842

  Fly   657 KAIGILVSLCLEKHAGVKQTTVYSKEQVLKGLRNAEKMVRAELKSLDTQP--AEMSLEEYF---- 715
            :|:.||.||.    .....|...|.|..:..|:..:....|....|..||  ..:||...|    
 Frog   843 RAVHILTSLT----ESSPYTPYNSPEHAISILKARKVYEHAMQDCLRQQPHWGRVSLSGCFALFQ 903

  Fly   716 ----QPNKLLILLRAICLI----EVLNNRRHKEARMWLNDLQNNEFGPEAVKDSERKRFLREQIM 772
                ..:..:::||....|    |.|:|            :..|...|               :.
 Frog   904 YLTVSVDAAVVVLRQAADIPMTPETLDN------------VAQNASSP---------------LQ 941

  Fly   773 EIQMLH---LRLSFLVFGEVEFYTGFKKIKLHELLENGLEEFPRNMVFLQLWASLKSIMWHKQRS 834
            .|.::|   ||..:.|       :.:....|.::|.:.|:.:|.|   :.||.|.  |....:..
 Frog   942 AITLMHTNLLRHHYKV-------SVYPLSPLRDILMSALKTYPCN---VSLWKSY--IRTEGKLH 994

  Fly   835 RLIRTKAGIASLAHLVVAI----------HNRFGIVDTNDKFSKEATRKM-----VCNRLVSIVE 884
            ...|.:..|.|:..:..|:          .:|..||::..:..:.....:     :.||:.::.|
 Frog   995 NASRVRRFIDSIRRMTPALEPCLFAIRAEEDRKKIVESVQRPDQGEVHSIFPETGLSNRIKALFE 1059

  Fly   885 TFLPTNLDRLDVEEEHYRILRRNSIYWRLY---MIALSKTNASFRRSKEVLIMAMDECPWDKSLL 946
            ..|.:...            .|..:.||||   |::|...    .|||.:...|:..|||.|:|.
 Frog  1060 YALQSEYG------------SRCPLLWRLYLHFMVSLGNK----ERSKGLFYKAIQSCPWAKALY 1108

  Fly   947 MEGAKVLPVKLASLQDLMTEKEIRIFAMPEEVDVL 981
            ::..:..|.:|....|||||||:|:....||:|:|
 Frog  1109 LDAVEYFPEQLQETIDLMTEKELRVRVPLEELDLL 1143

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5877NP_001259563.2 NRDE-2 180..>348 CDD:285605 36/191 (19%)
nrde2XP_031746460.1 NRDE2_MID 159..254 CDD:412062 17/94 (18%)
NRDE-2 310..643 CDD:400637 62/346 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D231700at33208
OrthoFinder 1 1.000 - - FOG0003950
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4981
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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