DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5877 and nrde-2

DIOPT Version :9

Sequence 1:NP_001259563.2 Gene:CG5877 / 32455 FlyBaseID:FBgn0030625 Length:984 Species:Drosophila melanogaster
Sequence 2:NP_496209.1 Gene:nrde-2 / 174589 WormBaseID:WBGene00011333 Length:1270 Species:Caenorhabditis elegans


Alignment Length:1237 Identity:208/1237 - (16%)
Similarity:403/1237 - (32%) Gaps:386/1237 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 TSAAGSAKQTTKPGEEEPSTGGNWKKNESYIKKHVNIATQGPESDSSSSTEDSEDEADKRKQDDV 76
            ||...::::.:......||            :.|.....:......|.|.|....:.::|::...
 Worm   132 TSQQSTSRKRSASNSRSPS------------RSHSRRYDRDNGRQRSRSREKKRRKKERRRKRSS 184

  Fly    77 TKTKNVHRGKTLEFDSSDGFYVDKVGNSSYRNIKTLKKPARPRYKTRMKRLGDGKYNPHD----- 136
            :::.:..|.:    |.|     .:..::|...:..:.|||:..:.|      |.:|...|     
 Worm   185 SRSSSSSRSR----DRS-----SRARDTSSHTLMKMNKPAKYAFLT------DEEYRTCDAYISS 234

  Fly   137 ------------FSRAHSKFSLKRSR-----------------------YVREKLIADAPSEDEV 166
                        :::...|..:.:.|                       |.|:|  .:.|..:::
 Worm   235 AFITQTKSDCENYTQGVPKKEIAKCRLSVKFIVGLEHNNILFNNIYGAEYARDK--ENRPFWEQL 297

  Fly   167 SRLQEQLIRTKVLVQQEPEVLDHWLQLHRLLNLNLDKANRLAVA--------------------- 210
            .|..:. :..:...:..|.|..:|....|:..||||..:...:|                     
 Worm   298 DRYLKD-VPKETFFRYVPPVGGYWKIRDRVDLLNLDHIDDDVLANDSDNRKDAFTFELEQAKKTF 361

  Fly   211 EQQIHSLETAMEHHPSNQQILRLYTHVANATYQANEVARRFEKMLK-------RN---------- 258
            .:.:|:::..::.....:::.|......:::..| .:|.|.::|:|       ||          
 Worm   362 SENVHNIDALIKVISMEEEMCRRNVGSFSSSNPA-ALAERHQEMVKKAIKADGRNAKLRLMKIEL 425

  Fly   259 ----------------------PFQYTLWSNLIMITQGDMACCNVSAVLRIYEYSMRRMHVGHND 301
                                  |.:..:|...:...|.|....|...:...:|..:|::     .
 Worm   426 LIKMDPNSPTIIDDFKNLTITFPHEPMVWIKYLDYIQYDSNVYNYKKLKNAFEDCIRQV-----T 485

  Fly   302 EITRRFIIKETDVI----MLKLFH-----NCLLFLRQSGHTNWMFALIRLSMELNFPYLTFECLQ 357
            .:|...::...:.:    :|::||     ..|.::....||..:.|.|:.:.|.||         
 Worm   486 GLTNGTLLSHLNAVNDRPLLRMFHLWIYIRYLKWMISCAHTPVVLANIQATFEYNF--------- 541

  Fly   358 AHAGREKALIGFEEVVLRSGMPMPEIWTRVEQLRQAYCFLPLKDKLASSTNVFKNKMNAERYFCS 422
                      |..:|..|:.....|...|:|:..::  .||   ::.....|...||..:....|
 Worm   542 ----------GLADVEKRTSTNSKEREVRLEEFWES--GLP---RIGDEGAVGAEKMLKQSEELS 591

  Fly   423 DKLVPYVHALKSQNNRLHLVLV--------------VVQLMKLPLIRSASLAD------KLNPC- 466
            |:.:.     |.:|:...:::.              .||:..:.:.|.....|      ||..| 
 Worm   592 DEDIQ-----KLENDDFDILISRTEETIATCLQAQRDVQISWIEVEREMMNIDARVKRTKLKDCE 651

  Fly   467 -IED-FGESEAIEMLFAAIVDRHSYAVA---SLQYQFDAAMIDL--------------------- 505
             .|| ..:.|..|:......||..|..|   ...:.|....::|                     
 Worm   652 LYEDHVDDLETCELWDIIPFDRIRYYEAPGDCANFDFVQPFLELLGVKFLNSTNCFTTTEQIISD 716

  Fly   506 --AREMSV----TPSYMPHL---VGHKL-----------------YAD-TVSNMLLKCVEVFIGE 543
              :.:.:|    ||:|....   ||:.:                 |.| |:...||..:.....|
 Worm   717 WISNDSTVNFYKTPTYTEKKCFEVGNNILKFMLYNRLKLTENNPEYLDKTMVKYLLAMLVTEASE 781

  Fly   544 ESKRRLLLILYLRFQKLLIVLHKSMGK-LTKKFFKDKRTRMRKLINLTENRNVISFYTEQALCE- 606
            :.|:       |.|....:.|...:|. :||.....||..:.|:..:......:|:: |:||.| 
 Worm   782 QEKK-------LNFHSFKLNLKNLVGTFITKHPDIFKRAMLSKITGIVYMEKFVSWW-ERALKEQ 838

  Fly   607 ---IEAKHYRLGFSIISR------------IITKKSEE-------------------------SS 631
               :||...|..:..|..            |:.||.:|                         .|
 Worm   839 EKVVEADERRKNYKEIKMEEGVVDDVKFDVILLKKDKERVQTIRDKIRDMIDIAIPKSTEKLIQS 903

  Fly   632 CISCVDTMHLYLVCAELHIHRGRISKAIGILVSLCLEKH--------AGVKQTTVYSKEQVL--- 685
            ..|.:.|:.|:|..   ::.|||:|    ||....||:.        .|:..:...|.|.:|   
 Worm   904 ADSSLPTLQLHLYA---NVLRGRLS----ILNQNALEETRDVFCKEILGIHTSEFESDEALLLAL 961

  Fly   686 -KGLRNAEKMVRAE--LKSLDTQP----AEMSLEE------YFQPNKLLILLRAI-CLI-EVLNN 735
             :||....:..:.:  |:|:|:.|    ||...|.      :...:|:....||: ||| ..:..
 Worm   962 DQGLNELLEHCKEKDNLESVDSIPELPRAEALCEALKVVAVFVFLDKMAFSRRAVDCLIANAITK 1026

  Fly   736 RRHKEARMWLNDLQNNEFGPEAVKDSERKRFLREQIMEIQMLHLRLSFLVFGEVEFYTGFKKIKL 800
            ....||:.  ||.....:  |...|....:|:.:.::.. ..|.:..|:      :...|||   
 Worm  1027 FEQFEAKK--NDFNRGTY--EKYCDQIDLKFITDTLITF-FSHKKHRFI------YNENFKK--- 1077

  Fly   801 HELLENGLEEFPRNMVFLQLWASLKSIMWHKQRSRLIRTKAGIASLAHLVVAIHNRFGIVDT--N 863
              |:....:.||.:..:.::...|.|              :|...:..|.....:|..|::.  :
 Worm  1078 --LIFQASQAFPCDSKYAKMLGELHS--------------SGRLQVMKLQGFTDSRNSILNAKRD 1126

  Fly   864 DKFSKEATRKMVCNRLVSIVETFLPTNLDRLDVEEEHYRILRRN----------SIYWRLYMIAL 918
            .:|..|...:::.|.|..:.......|    .:.:...:||.:|          ...||..:...
 Worm  1127 QQFDPELETRLLMNSLTIMFSWMNAAN----RIGDAGNQILYKNWKREAANTRDPAIWRQVIRVA 1187

  Fly   919 SKTNASFRRSKEVLIMAMDECPWDKSLLMEGAKVLPVK----LASLQDLMTE----KEIRIFAMP 975
            ||.:....:. :....|..:|.|..:|..:..:...|:    |..:..|:.|    :|..:|...
 Worm  1188 SKLSQKILKD-DAYTRARGQCTWALNLHFDYIEAKTVRKNGDLMEMIYLILEQSMGQEHSLFVTD 1251

  Fly   976 EE 977
            ||
 Worm  1252 EE 1253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5877NP_001259563.2 NRDE-2 180..>348 CDD:285605 35/236 (15%)
nrde-2NP_496209.1 NRDE-2 353..671 CDD:369867 54/352 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160158354
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1972
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003950
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR13471
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1860
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.960

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