DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9095 and arc2

DIOPT Version :10

Sequence 1:NP_001096984.1 Gene:CG9095 / 32447 FlyBaseID:FBgn0030617 Length:1141 Species:Drosophila melanogaster
Sequence 2:NP_001156329.1 Gene:arc2 / 779565 XenbaseID:XB-GENE-6453946 Length:328 Species:Xenopus tropicalis


Alignment Length:233 Identity:53/233 - (22%)
Similarity:93/233 - (39%) Gaps:25/233 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   332 NGDELTV----SFWSHPGGDEDCARFDGSKGWLWSD--TNCNTLLNFICQHQPK-TCGRPEQPPN 389
            ||.::..    .:.|.||    ..|:....|..||:  |.|..:.   |::..: ..|:.|:|.|
 Frog    50 NGSKINYDCLPGYRSIPG----TIRYVTCLGSTWSNPPTFCEVVK---CRNPGEIQNGQIEEPIN 107

  Fly   390 STMVALNGFEVGAQIKYSCDANHLLVGPAT-RTCLETGFYNEFPPVCKYIECGLPASIAHGSYAL 453
            .:.        |:::.:.|:..:.::.... |.|...|.::...|.|:...|..|.:|..|.::.
 Frog   108 QSF--------GSRVVFKCNTGYRMLSKLNYRDCQSNGEWSNDVPKCEAQVCPPPTAITDGDFSP 164

  Fly   454 LNNTVGYLSLVKYSCEEGYEMIGRALLTCDFDERWNGPPPRCEIVECDTLPGNYYSTIINAPNGT 518
            ..:...|...|.:.|.:...::|...|.|.....|:...|.|:.|.|: .|.......|:...|.
 Frog   165 QKDEYSYQDSVTFKCNKDLALVGSTSLFCTAHGNWSSDEPNCKDVVCE-YPHVENGQKISGLRGP 228

  Fly   519 YYGSKA-EISCPPGYRMEGPRVLTCLASGQWSSALPRC 555
            |..:.| ...|..|:.:.||:.:||.....|...||.|
 Frog   229 YKLNYAVTFKCDNGFELTGPQTITCTVDNIWEPPLPEC 266

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9095NP_001096984.1 CCP 37..93 CDD:153056
FTP 94..242 CDD:128870
CLECT 256..375 CDD:214480 11/48 (23%)
PHA02927 <368..557 CDD:222943 42/191 (22%)
PHA03247 <527..725 CDD:223021 10/29 (34%)
arc2NP_001156329.1 PHA02927 7..268 CDD:222943 53/233 (23%)
Blue background indicates that the domain is not in the aligned region.

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