DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9095 and arc3

DIOPT Version :10

Sequence 1:NP_001096984.1 Gene:CG9095 / 32447 FlyBaseID:FBgn0030617 Length:1141 Species:Drosophila melanogaster
Sequence 2:NP_001120599.1 Gene:arc3 / 100145756 XenbaseID:XB-GENE-6454074 Length:562 Species:Xenopus tropicalis


Alignment Length:286 Identity:74/286 - (25%)
Similarity:104/286 - (36%) Gaps:63/286 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   337 TVSFWSHPGGDEDCARFDGSKGWLWSDTNCNTLLNFICQHQPKTCGRP-EQPPNSTMVALNGFEV 400
            |..::..||........|   .:.||..             |:.|.|. :.||......|...::
 Frog    58 TAGYYEIPGRSRTITCQD---DFTWSTV-------------PEFCIRACDSPPRLDFAQLGQEDI 106

  Fly   401 -------GAQIKYSCDANHLLVGPATRT--CLETGFYNEFPPVCKYIECGLPASIAHGSYALLNN 456
                   |..:||.|...:..:....||  ||:...:......|:...||.|..|.:|.:...::
 Frog   107 NKNIYLNGTTVKYDCRPGYKRIPGTDRTISCLDNFTWTAPQSFCQRRSCGHPGEIDNGEFEPTDS 171

  Fly   457 TVGYLSLVKYSCEEGYEMIGRAL-LTCDFDERWNGPPPRCEIVECDTLPGNYYSTIINAPNGTYY 520
            ...:.|.|.|.|.|||.||.:.| .||..|.:|:...|:||::.| |.||:     ||  :|.|.
 Frog   172 EFLFGSTVTYKCNEGYRMISKQLSKTCKSDGKWSISFPQCEVMVC-TAPGD-----IN--DGFYK 228

  Fly   521 GSKAE--------ISCPPGYRMEGPRVLTCLASGQWSSALPRCIKLEPSTQPTAASTIPVPSSVA 577
            ..|.|        ..|...:.:.|.|...|.:.|.|||..|.|                  ..|.
 Frog   229 PQKEEYHYQEAVTYGCNNNFALIGNRSAYCTSDGTWSSQAPVC------------------KDVK 275

  Fly   578 TPPPFRPKVVSSTTSRTPY--RPAVS 601
            .|.|..|....|:....||  |.|||
 Frog   276 CPEPNVPNARKSSGFLGPYLLRSAVS 301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9095NP_001096984.1 CCP 37..93 CDD:153056
FTP 94..242 CDD:128870
CLECT 256..375 CDD:214480 6/37 (16%)
PHA02927 <368..557 CDD:222943 57/207 (28%)
PHA03247 <527..725 CDD:223021 21/77 (27%)
arc3NP_001120599.1 CCP 28..87 CDD:153056 7/44 (16%)
PHA02927 86..332 CDD:222943 67/242 (28%)
PHA02927 331..>510 CDD:222943
Blue background indicates that the domain is not in the aligned region.

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