DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL37a and AT1G15250

DIOPT Version :9

Sequence 1:NP_001259561.1 Gene:RpL37a / 32446 FlyBaseID:FBgn0030616 Length:93 Species:Drosophila melanogaster
Sequence 2:NP_001319009.1 Gene:AT1G15250 / 838092 AraportID:AT1G15250 Length:95 Species:Arabidopsis thaliana


Alignment Length:93 Identity:66/93 - (70%)
Similarity:76/93 - (81%) Gaps:1/93 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTKGTSSFGKRHNKTHTLCRRCGRSSYHIQKSTCAQCGYPAAKLRSYNWSVKAKRRKTTGTGRMQ 65
            |.|||.|||||.||:||||.||||.|:|||||.|:.|.||||:.|:|||||||.||||||||||:
plant     1 MGKGTGSFGKRRNKSHTLCVRCGRRSFHIQKSRCSACAYPAARKRTYNWSVKAIRRKTTGTGRMR 65

  Fly    66 HLKVVRRRFRNGFREGTQAKPK-KAVAS 92
            :|:.|.|||:..|||||||.|: ||.||
plant    66 YLRNVPRRFKTCFREGTQATPRNKAAAS 93

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL37aNP_001259561.1 PTZ00073 1..91 CDD:240257 64/90 (71%)
AT1G15250NP_001319009.1 PTZ00073 1..91 CDD:240257 63/89 (71%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 91 1.000 Domainoid score I2619
eggNOG 1 0.900 - - E1_COG2126
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H68110
Inparanoid 1 1.050 144 1.000 Inparanoid score I1761
OMA 1 1.010 - - QHG53564
OrthoDB 1 1.010 - - D1560654at2759
OrthoFinder 1 1.000 - - FOG0001246
OrthoInspector 1 1.000 - - mtm1080
orthoMCL 1 0.900 - - OOG6_100852
Panther 1 1.100 - - O PTHR10768
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X874
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.840

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