DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RpL37a and kcna7

DIOPT Version :9

Sequence 1:NP_001259561.1 Gene:RpL37a / 32446 FlyBaseID:FBgn0030616 Length:93 Species:Drosophila melanogaster
Sequence 2:XP_701294.4 Gene:kcna7 / 572481 ZFINID:ZDB-GENE-120215-257 Length:233 Species:Danio rerio


Alignment Length:71 Identity:18/71 - (25%)
Similarity:22/71 - (30%) Gaps:31/71 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KGTSSFG--KRHNKTHTLCRRCGRS------------------SYHIQKSTCAQ-----CGYPAA 42
            ||....|  ||.|      ||.|.:                  .|..|..|.||     .|.|..
Zfish    40 KGDKEKGEKKREN------RRSGSTWRGGWALSERLAINVSGMRYETQIRTLAQFPDSLLGDPRR 98

  Fly    43 KLRSYN 48
            :||.::
Zfish    99 RLRYFD 104

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL37aNP_001259561.1 PTZ00073 1..91 CDD:240257 18/71 (25%)
kcna7XP_701294.4 BTB_2 71..160 CDD:280393 9/34 (26%)
BTB 71..158 CDD:197585 9/34 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2126
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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