DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL37-1 and kcnf1a

DIOPT Version :10

Sequence 1:NP_573005.1 Gene:RpL37-1 / 32446 FlyBaseID:FBgn0030616 Length:93 Species:Drosophila melanogaster
Sequence 2:NP_001076280.1 Gene:kcnf1a / 557280 ZFINID:ZDB-GENE-041001-217 Length:494 Species:Danio rerio


Alignment Length:93 Identity:20/93 - (21%)
Similarity:39/93 - (41%) Gaps:13/93 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTKGTSSFGKRHNKTHTLCRRCGRSSYHIQKSTCAQCGYPAAKLRSY----NWSVKAKRRKTTGT 61
            :|..|..:|..:.|| || .||..:...:       ||..|..|..:    |:.:...:::...|
Zfish   369 ITMTTVGYGDIYPKT-TL-GRCNAAVSFL-------CGVIAIALPIHPIINNFVIVYSKQRVLET 424

  Fly    62 GRMQHLKVVRRRFRNGFREGTQAKPKKA 89
            .....::::..|.|...:|..:|:.:.|
Zfish   425 AAKHEIELMALRAREEAQECPEAERRAA 452

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL37-1NP_573005.1 PTZ00073 1..91 CDD:240257 20/93 (22%)
kcnf1aNP_001076280.1 BTB_POZ_Kv5_KCNF1 21..136 CDD:349690
Ion_trans 184..420 CDD:459842 14/59 (24%)
Blue background indicates that the domain is not in the aligned region.

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