DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL37-1 and Shal

DIOPT Version :10

Sequence 1:NP_573005.1 Gene:RpL37-1 / 32446 FlyBaseID:FBgn0030616 Length:93 Species:Drosophila melanogaster
Sequence 2:NP_001097646.1 Gene:Shal / 40129 FlyBaseID:FBgn0005564 Length:571 Species:Drosophila melanogaster


Alignment Length:49 Identity:10/49 - (20%)
Similarity:21/49 - (42%) Gaps:5/49 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 RSYNWSVKAKRRKTTGTGRMQHLKVVRRRFRNGFREGTQAKPKKAVASK 93
            |.|:.:.:|.:||.....|:..:::.:......|     ...|||..::
  Fly   411 RIYHQNQRADKRKAQRKARLARIRIAKASSGAAF-----VSKKKAAEAR 454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL37-1NP_573005.1 PTZ00073 1..91 CDD:240257 10/45 (22%)
ShalNP_001097646.1 BTB_POZ_Shal-like 6..144 CDD:349727
Ion_trans 188..415 CDD:459842 2/3 (67%)
DUF3399 471..535 CDD:463381
Blue background indicates that the domain is not in the aligned region.

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