DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL37a and KCNQ3

DIOPT Version :9

Sequence 1:NP_001259561.1 Gene:RpL37a / 32446 FlyBaseID:FBgn0030616 Length:93 Species:Drosophila melanogaster
Sequence 2:NP_004510.1 Gene:KCNQ3 / 3786 HGNCID:6297 Length:872 Species:Homo sapiens


Alignment Length:59 Identity:14/59 - (23%)
Similarity:24/59 - (40%) Gaps:13/59 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 QKSTCAQCGYPAAKLRSYN---------WSVKAKRRKTTGTGRMQHLKVVRRRFRNGFR 79
            |.|..|..|.|.|:.|.|.         .::||..|..    |:...::.:::|:...|
Human   485 QSSEDAGTGDPMAEDRGYGNDFPIEDMIPTLKAAIRAV----RILQFRLYKKKFKETLR 539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL37aNP_001259561.1 PTZ00073 1..91 CDD:240257 14/59 (24%)
KCNQ3NP_004510.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..43
Ion_trans 139..363 CDD:278921
Ion_trans_2 269..353 CDD:285168
Selectivity filter. /evidence=ECO:0000250 316..321
Mediates interaction with calmodulin. /evidence=ECO:0000269|PubMed:27564677 356..537 13/55 (24%)
KCNQ_channel 452..656 CDD:281513 14/59 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 575..611
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 764..872
KCNQC3-Ank-G_bd 780..866 CDD:288784
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2126
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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