DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL37a and Sh

DIOPT Version :9

Sequence 1:NP_001259561.1 Gene:RpL37a / 32446 FlyBaseID:FBgn0030616 Length:93 Species:Drosophila melanogaster
Sequence 2:NP_001303569.1 Gene:Sh / 32780 FlyBaseID:FBgn0003380 Length:655 Species:Drosophila melanogaster


Alignment Length:28 Identity:7/28 - (25%)
Similarity:16/28 - (57%) Gaps:0/28 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 RKTTGTGRMQHLKVVRRRFRNGFREGTQ 83
            ::.|.|...|..:..:::.:|||::..|
  Fly   582 QQLTQTQLYQQQQQQQQQQQNGFKQQQQ 609

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL37aNP_001259561.1 PTZ00073 1..91 CDD:240257 7/28 (25%)
ShNP_001303569.1 BTB_2 99..187 CDD:280393
BTB 99..182 CDD:197585
Ion_trans 274..488 CDD:278921
Ion_trans_2 403..479 CDD:285168
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2126
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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