DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL37a and Kcng4

DIOPT Version :9

Sequence 1:NP_001259561.1 Gene:RpL37a / 32446 FlyBaseID:FBgn0030616 Length:93 Species:Drosophila melanogaster
Sequence 2:NP_001100905.1 Gene:Kcng4 / 307900 RGDID:1308553 Length:506 Species:Rattus norvegicus


Alignment Length:8 Identity:4/8 - (50%)
Similarity:5/8 - (62%) Gaps:0/8 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 CGRSSYHI 29
            |.|..|:|
  Rat   253 CARKCYYI 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL37aNP_001259561.1 PTZ00073 1..91 CDD:240257 4/8 (50%)
Kcng4NP_001100905.1 BTB 60..167 CDD:197585
BTB_2 60..159 CDD:280393
Ion_trans 260..463 CDD:278921 1/1 (100%)
Ion_trans_2 397..457 CDD:285168
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2126
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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