DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RpL37-1 and Kcna4

DIOPT Version :10

Sequence 1:NP_573005.1 Gene:RpL37-1 / 32446 FlyBaseID:FBgn0030616 Length:93 Species:Drosophila melanogaster
Sequence 2:NP_037103.2 Gene:Kcna4 / 25469 RGDID:2952 Length:654 Species:Rattus norvegicus


Alignment Length:15 Identity:4/15 - (26%)
Similarity:9/15 - (60%) Gaps:0/15 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 KAKRRKTTGTGRMQH 66
            :.:||:.|...::.|
  Rat    83 RRRRRQRTEKKKLHH 97

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL37-1NP_573005.1 PTZ00073 1..91 CDD:240257 4/15 (27%)
Kcna4NP_037103.2 K_channel_TID 1..>37 CDD:429748
BTB_POZ 177..304 CDD:453885
Ion_trans 307..571 CDD:459842
S4-S5 linker. /evidence=ECO:0000250|UniProtKB:P63142 463..476
Selectivity filter. /evidence=ECO:0000250|UniProtKB:P63142 525..530
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 630..654
PDZ-binding. /evidence=ECO:0000269|PubMed:7477295 652..654
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.