DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL37a and Kcnq5

DIOPT Version :9

Sequence 1:NP_001259561.1 Gene:RpL37a / 32446 FlyBaseID:FBgn0030616 Length:93 Species:Drosophila melanogaster
Sequence 2:NP_001153611.1 Gene:Kcnq5 / 226922 MGIID:1924937 Length:952 Species:Mus musculus


Alignment Length:97 Identity:21/97 - (21%)
Similarity:32/97 - (32%) Gaps:15/97 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 FGKRHNKTHTLCRRCGRSSYHIQKS--------------TCAQCGYPAAKLRSYNWSVKAKRRKT 58
            |.||.|....|.:...||....:||              ||:.......:..|..:....::...
Mouse   364 FEKRRNPAANLIQCVWRSYAADEKSVSIATWKPHLKALHTCSPTKKEQGEASSSKFCSNKQKFFR 428

  Fly    59 TGTGRMQHLKV-VRRRFRNGFREGTQAKPKKA 89
            ..|.|.|..|: .:.|.|.....|...|.::|
Mouse   429 VYTSRKQSQKLSFKERVRMASPRGQSIKSRQA 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL37aNP_001259561.1 PTZ00073 1..91 CDD:240257 21/97 (22%)
Kcnq5NP_001153611.1 Ion_trans 161..359 CDD:278921
Ion_trans_2 275..349 CDD:285168
Selectivity filter. /evidence=ECO:0000250 312..317
KCNQ_channel 473..660 CDD:281513
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 597..617
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 897..952
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2126
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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