DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RpL37-1 and Kcnc3

DIOPT Version :10

Sequence 1:NP_573005.1 Gene:RpL37-1 / 32446 FlyBaseID:FBgn0030616 Length:93 Species:Drosophila melanogaster
Sequence 2:XP_036008594.1 Gene:Kcnc3 / 16504 MGIID:96669 Length:807 Species:Mus musculus


Alignment Length:17 Identity:6/17 - (35%)
Similarity:10/17 - (58%) Gaps:4/17 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 WSVKAKRRKTTGTGRMQ 65
            ||.:.::    |||:.|
Mouse     8 WSFRGRQ----GTGKQQ 20

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL37-1NP_573005.1 PTZ00073 1..91 CDD:240257 6/17 (35%)
Kcnc3XP_036008594.1 BTB_KCNC1_3 91..204 CDD:349721
Ion_trans 290..551 CDD:459842
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.