DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL37-1 and Kcna1

DIOPT Version :10

Sequence 1:NP_573005.1 Gene:RpL37-1 / 32446 FlyBaseID:FBgn0030616 Length:93 Species:Drosophila melanogaster
Sequence 2:NP_034725.3 Gene:Kcna1 / 16485 MGIID:96654 Length:495 Species:Mus musculus


Alignment Length:42 Identity:10/42 - (23%)
Similarity:15/42 - (35%) Gaps:9/42 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 HTLCRR----CGRSSYHIQKSTCAQ-----CGYPAAKLRSYN 48
            |..|.|    .....:..|..|.||     .|.|..::|.::
Mouse    33 HECCERVVINISGLRFETQLKTLAQFPNTLLGNPKKRMRYFD 74

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL37-1NP_573005.1 PTZ00073 1..91 CDD:240257 10/42 (24%)
Kcna1NP_034725.3 Tetramerization domain. /evidence=ECO:0000250|UniProtKB:P10499 1..128 10/42 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..30
BTB_POZ 37..163 CDD:453885 8/38 (21%)
Ion_trans 166..418 CDD:459842
S4-S5 linker. /evidence=ECO:0000250|UniProtKB:P63142 310..323
Selectivity filter. /evidence=ECO:0000250|UniProtKB:P63142 372..377
PDZ-binding. /evidence=ECO:0000250 493..495
Blue background indicates that the domain is not in the aligned region.

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