DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4s3 and cyp4v2.2

DIOPT Version :10

Sequence 1:NP_573003.2 Gene:Cyp4s3 / 32444 FlyBaseID:FBgn0030615 Length:495 Species:Drosophila melanogaster
Sequence 2:NP_001072667.1 Gene:cyp4v2.2 / 780124 XenbaseID:XB-GENE-977085 Length:523 Species:Xenopus tropicalis


Alignment Length:511 Identity:208/511 - (40%)
Similarity:305/511 - (59%) Gaps:23/511 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 ALVAFVLWAAFLRYLPKILNFLRLQRFAKTLPG-----PTIGE-LIANVKKGEILNWLKELREKH 63
            |:|...|.|  |..||.:.:::|.:|..|.:||     |.||: |......|:....:.|..|.:
 Frog    16 AVVLLTLLA--LSILPALQDYVRKRRILKPIPGPGPNYPLIGDALFLKNNGGDFFLQICEYTESY 78

  Fly    64 --GPVFRIWFGKDLMVMFTDPEDIKQLLGNNQLLTKSRNYELLEPWLGKGLLTNGGESWHRRRKL 126
              .|:.::|.|....::....:.::.:|.:::.:.|:..|:.|.|||||||||:.||.|..|||:
 Frog    79 RLQPLLKVWIGTIPFIVVYHADTVEPVLSSSKHMDKAFLYKFLHPWLGKGLLTSTGEKWRSRRKM 143

  Fly   127 LTPGFHFRILSEFKEPMEENCRILVRRLRTKANGESFDIYPYITLFALDAICETAMGIKKHAQLQ 191
            :||.|||.|||||.|.|.|..:|||.:|:|..:|||||.:..:||.|||.|.|||||.|..||..
 Frog   144 ITPTFHFAILSEFLEVMNEQSKILVEKLQTHVDGESFDCFMDVTLCALDIISETAMGRKIQAQSN 208

  Fly   192 SDSEYVQAVQSICRVMHKQSFSFWQRLNVFFKHTKPGKEREAALKVLHDETNRVIRLRREQLIQE 256
            .|||||||:..:..::.::....|..|:..:.|.:.|||.:..||:||..|::.|..|.|:|.:.
 Frog   209 RDSEYVQAIYKMSDIIQRRQKMPWLWLDFLYAHLRDGKEHDKNLKILHSFTDKAILERAEELKKM 273

  Fly   257 RNEWKPEAEQDDVG--AKRRLAFLDMLLLTQMEGGAELSDTDIREEVDTFMFEGHDTTSSAIAFA 319
            ..:.|...:.|...  .|:|.|||||||:...:.|.::|..|||||||||||||||||::|:.::
 Frog   274 GEQKKEHCDSDPESDKPKKRSAFLDMLLMATDDAGNKMSYMDIREEVDTFMFEGHDTTAAALNWS 338

  Fly   320 LSLLSKNPDVQQRAFEEASELEGR--------EKESMPYLEAVIKETLRIYPSVPFFSRKVLEDL 376
            |.||..:|:.|::..:|..|:.|:        :.:.:.||||||||:||||||||.|.|.|.||.
 Frog   339 LFLLGSHPEAQRQVHKELDEVFGKSDRPVTMDDLKKLRYLEAVIKESLRIYPSVPLFGRTVTEDC 403

  Fly   377 EVGKLTVPKGASISCLIYMLHRDPKNFPDPERFDPDRFL-VNEKQMHPFAFAAFSAGPRNCIGQK 440
            .:....||||.::..:.|.|||||:.||:||.|.|:||. .|....:|:|:..||||.||||||:
 Frog   404 SIRGFHVPKGVNVVIIPYALHRDPEYFPEPEEFRPERFFPENASGRNPYAYIPFSAGLRNCIGQR 468

  Fly   441 FAMLELKTSLAMLLRSYRF-LPDKDHQPKPLAELVTKSGNGIRLRILPRDENGTTA 495
            ||::|.|..|:.:||:|.. ...|..:...|.||:.:..:|:.:::..| |...||
 Frog   469 FALMEEKVVLSSILRNYWVEASQKREELCLLGELILRPQDGMWIKLKNR-ETAPTA 523

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4s3NP_573003.2 CYP4 64..483 CDD:410721 185/430 (43%)
cyp4v2.2NP_001072667.1 CYP4V 70..512 CDD:410773 187/441 (42%)

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