DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4s3 and cyp26b1

DIOPT Version :10

Sequence 1:NP_573003.2 Gene:Cyp4s3 / 32444 FlyBaseID:FBgn0030615 Length:495 Species:Drosophila melanogaster
Sequence 2:NP_001072655.1 Gene:cyp26b1 / 780112 XenbaseID:XB-GENE-991500 Length:511 Species:Xenopus tropicalis


Alignment Length:538 Identity:135/538 - (25%)
Similarity:219/538 - (40%) Gaps:101/538 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSTLA--LVAFVLWAAFLRYLPKILNFLRLQRFAKT--------LPGPTIGELIANVKKGEILNW 55
            ::|||  ||:..|..|..:.|.::       |:|.|        :|..::|..:.    ||..:|
 Frog    12 LATLAACLVSVALLLAVSQQLWQL-------RWAATRDKSCKLPIPKGSMGFPLV----GETFHW 65

  Fly    56 L-------KELREKHGPVFRIWFGKDLMVMFTDPEDIKQ-LLGNNQLLTKS--RNYELLEPWLGK 110
            :       ...|||:|.||:.......::..|..|:::: |:|.:.|::..  |:..:|   ||.
 Frog    66 ILQGSDFQSSRREKYGNVFKTHLLGRPLIRVTGAENVRKILMGEHHLVSTEWPRSTRML---LGP 127

  Fly   111 GLLTNG-GESWHRRRKLLTPGFHFRILSEFKEPMEENCRILVRRLRT-KANGESFDIYPYITLFA 173
            ..|.|. |:....:||:.:..|....|..:...::   .::...||. .:|.||.::|.......
 Frog   128 NSLANSIGDIHRHKRKVFSKIFSHEALESYLPKIQ---LVIQDTLRVWSSNPESINVYCEAQKLT 189

  Fly   174 LDAICETAMGIKKHAQLQSDSEYVQAVQSICRVMHKQSFSFWQRL--NVF-------FKHTKPG- 228
            ........:|.:     .||.|.            .|.|..:|:.  |||       |...:.| 
 Frog   190 FRMAIRVLLGFR-----LSDEEL------------SQLFQVFQQFVENVFSLPVDVPFSGYRRGI 237

  Fly   229 KEREAALKVLHDETNRVIRLRREQLIQERNEWKPEAEQDDVGAKRRLAFLDMLLLTQMEGGAELS 293
            :.||..||.|            |:.|||:.:.....:..|.        ||:|:.:..|.|.||:
 Frog   238 RAREMLLKSL------------EKAIQEKLQNTQGKDYADA--------LDILIESGKEHGKELT 282

  Fly   294 DTDIREEVDTFMFEGHDTTSSAIAFALSLLSKNPDVQQRAFEE---------ASELEGREK---- 345
            ..::::.....:|..:.||:||....:..|.|:|.|.::..||         ....||..:    
 Frog   283 MQELKDGTLELIFAAYATTASASTSLIMQLLKHPSVLEKLREELRGNSILHNGCVCEGALRVETI 347

  Fly   346 ESMPYLEAVIKETLRIYPSVPFFSRKVLEDLEVGKLTVPKGASISCLIYMLHRDPKNFPDPERFD 410
            .|:.||:.||||.||::..|....|.||:..|:....:|||.|:...|...|.....|.|.:.||
 Frog   348 SSLHYLDCVIKEILRLFSPVSGGYRTVLQTFELDGFQIPKGWSVLYSIRDTHDTAPVFKDVDVFD 412

  Fly   411 PDRFLVN--EKQMHPFAFAAFSAGPRNCIGQKFAMLELKTSLAMLLRSYRFLPDKDHQPKPLAEL 473
            ||||..:  |.:...|.:..|..|.|||:|:..|.|.||.....|....||.......||.:...
 Frog   413 PDRFGQDRTEDKDGRFHYLPFGGGVRNCLGKHLAKLFLKVLAIELASMSRFELATRTFPKIMPVP 477

  Fly   474 VTKSGNGIRLRILPRDEN 491
            |....:.:::|....|.|
 Frog   478 VVHPADELKVRFFGLDSN 495

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4s3NP_573003.2 CYP4 64..483 CDD:410721 113/448 (25%)
cyp26b1NP_001072655.1 CYP26B1 60..489 CDD:410730 119/471 (25%)

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