DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4s3 and cyp46a1.3

DIOPT Version :9

Sequence 1:NP_573003.2 Gene:Cyp4s3 / 32444 FlyBaseID:FBgn0030615 Length:495 Species:Drosophila melanogaster
Sequence 2:NP_001027517.1 Gene:cyp46a1.3 / 613109 XenbaseID:XB-GENE-969052 Length:504 Species:Xenopus tropicalis


Alignment Length:520 Identity:133/520 - (25%)
Similarity:252/520 - (48%) Gaps:76/520 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LALVAFVLWAAFLRYL----------PKILNFLRLQRFAKTLPGPTIGELIAN--VKKGEILNWL 56
            |.|:.|:|::.::.|:          |:...||.        ..||:..|:.|  :.....|.|:
 Frog    17 LILICFLLFSGYIHYIHMKYDHIPGPPRDSFFLG--------HSPTMLRLMKNNLLMYDHFLGWV 73

  Fly    57 KELREKHGPVFRIWFGKDLMVMFTDPEDIKQLLGNNQLLTKSRNYELLE-----PWLGKGLLTNG 116
                :|:|||.||.....::::...||.:|:||.:.: .:|.:.|:::.     .::||||:|:.
 Frog    74 ----QKYGPVVRINGLHRVIILVVSPEAVKELLMSPK-YSKDKFYDVIANMFGVRFMGKGLVTDR 133

  Fly   117 G-ESWHRRRKLLTPGFHFRILSEFKEPMEENCRILVRRLRTKANGE-SFDIYPYITLFALDAICE 179
            . :.||::|:::.|.|....|.....|..|....|:.:|..||:|: ...::..::...||.|.:
 Frog   134 DYDHWHKQRRIMDPAFSRTYLMGLMGPFNEKAEELMEKLMEKADGKCEIKMHDMLSRLTLDVIGK 198

  Fly   180 TAMGIKKHAQLQSDSEYVQAVQSICRVMHKQSFSFWQRLNVFFKHTKPGKEREAALKVLHDETNR 244
            .|.|::.::.....:.:.:|:..:.:.:.:.     :...|.:...|.|..|:.      .|:.|
 Frog   199 VAFGMELNSLNDDLTPFPKAISLVMKGIVEM-----RNPMVRYSLAKRGFIRKV------QESIR 252

  Fly   245 VIRLRREQLIQERNEWKPEAEQDDVGAKRRLAFLDMLLLTQMEGGAELSDTDIREEVD------- 302
            ::|...::.|:.|.:...:.|:..|.           :|||:..||.:     .||.|       
 Frog   253 LLRQTGKECIERRQKQIQDGEEIPVD-----------ILTQILKGAAM-----EEECDPEILLDN 301

  Fly   303 --TFMFEGHDTTSSAIAFALSLLSKNPDVQQRAFEEASELEGREKE-------SMPYLEAVIKET 358
              ||...|.:||::.::|.:..|.:||::.::|..|..|:.|.:::       .:.||..|:|||
 Frog   302 FVTFFIAGQETTANQLSFVVMELGRNPEILEKAQAEIDEVIGSKRDIEYEDLGKLQYLSQVLKET 366

  Fly   359 LRIYPSVPFFSRKVLEDLEVGKLTVPKGASISCLIYMLHRDPKNFPDPERFDPDRFLVNEKQMHP 423
            ||:||:.|..||.:.||:.:..:.||:..:|....|::.|..:.:.||..|:||||..:..:.: 
 Frog   367 LRLYPTAPGTSRGLTEDMVIDGVKVPENVTIMLNSYIMGRMEQYYSDPLTFNPDRFSPDAPKPY- 430

  Fly   424 FAFAAFSAGPRNCIGQKFAMLELKTSLAMLLRSYRFLPDKDHQPKPLAELVTKSGNGIRLRILPR 488
            :::..||.|||:||||.|:.:|.|..:|.||:.|.|...:....|.|.....:..:|:..|:.||
 Frog   431 YSYFPFSLGPRSCIGQVFSQMEAKVVMAKLLQRYEFELAEGQSFKILDTGTLRPLDGVICRLRPR 495

  Fly   489  488
             Frog   496  495

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4s3NP_573003.2 p450 35..469 CDD:278495 119/458 (26%)
cyp46a1.3NP_001027517.1 p450 40..491 CDD:306555 125/491 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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