DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4s3 and cyp4v2b

DIOPT Version :10

Sequence 1:NP_573003.2 Gene:Cyp4s3 / 32444 FlyBaseID:FBgn0030615 Length:495 Species:Drosophila melanogaster
Sequence 2:NP_001073465.2 Gene:cyp4v2b / 562008 ZFINID:ZDB-GENE-061103-88 Length:510 Species:Danio rerio


Alignment Length:508 Identity:207/508 - (40%)
Similarity:299/508 - (58%) Gaps:25/508 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSTLALVAFVLWAAFLRYLPKILNFLRLQRFAKTLPG-----PTIGELIA-NVKKGEILNWLKE- 58
            :..|.....:|..|...|.| :.|::......:.:||     |.||..:. ....|:..|.:.| 
Zfish    10 LGILFTAVLLLLLASTAYNP-LKNYIGKWNEMRPIPGMAGAYPIIGNALQFKTNAGDFFNQIIEG 73

  Fly    59 -LREKHGPVFRIWFGKDLMVMFTDPEDIKQLLGNNQLLTKSRNYELLEPWLGKGLLTNGGESWHR 122
             ...:|.|:.::|.|....::....|:|:.:|.|::.|.||.:|..|.||||.||||:.||.|..
Zfish    74 TNENRHLPLAKVWVGPVPFLILYHAENIEVVLSNSRHLDKSYSYRFLHPWLGTGLLTSTGEKWRN 138

  Fly   123 RRKLLTPGFHFRILSEFKEPMEENCRILVRRLRTKANGESFDIYPYITLFALDAICETAMGIKKH 187
            |||:|||.|||.|||:|.|.|.|...||:::::...:||.|:.:.:|||.|||.|||||||.|.:
Zfish   139 RRKMLTPTFHFSILSDFLEVMNEQTDILIQKMQKLEDGEPFNCFNFITLCALDIICETAMGKKIY 203

  Fly   188 AQLQSDSEYVQAVQSICRVMHKQSFSFWQRLNVFFKHTKPGKEREAALKVLHDETNRVIRLRREQ 252
            ||..:||||||:|..:..::.|:..:.|...:..:...|.|||....||:||..|..|||.|.|.
Zfish   204 AQSNADSEYVQSVYKMSDIITKRQRAPWLWPDWIYNKLKEGKEHAKRLKILHSFTANVIRERAEF 268

  Fly   253 LIQERNEWKPEAEQDDVGAKRRLAFLDMLLLTQMEGGAELSDTDIREEVDTFMFEGHDTTSSAIA 317
            :..|     |:::.|. |.::|.|||||||.|..|.|.:||..||:||||||||||||||::::.
Zfish   269 MSSE-----PDSDSDQ-GGRKRQAFLDMLLKTTYENGQKLSHEDIQEEVDTFMFEGHDTTAASMN 327

  Fly   318 FALSLLSKNPDVQQRAFEEASELEG--------REKESMPYLEAVIKETLRIYPSVPFFSRKVLE 374
            :||.|:..:|:||:....|..|:.|        .:.:.:.|||.||||:|||:||||.|:|.:.|
Zfish   328 WALHLIGSHPEVQKAVQAELQEVFGSSERHVGVEDLKKLRYLECVIKESLRIFPSVPLFARSICE 392

  Fly   375 DLEVGKLTVPKGASISCLIYMLHRDPKNFPDPERFDPDRFL-VNEKQMHPFAFAAFSAGPRNCIG 438
            ...:....||||.:...:.|.|||||:.||:||.|.|:||: .|.|..||:|:..||||||||||
Zfish   393 ACHINGFKVPKGVNAVIIPYALHRDPRYFPEPEEFQPERFMPENSKGRHPYAYIPFSAGPRNCIG 457

  Fly   439 QKFAMLELKTSLAMLLRSYRFLPDKDHQP-KPLAELVTKSGNGIRLRILPRDE 490
            |:|||:|.|..||.:||.:.....:..:. :||.||:.:...||.:::..|.:
Zfish   458 QRFAMMEEKVVLATILRHFDVEACQSREELRPLGELILRPEKGIWIKLQRRSK 510

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4s3NP_573003.2 CYP4 64..483 CDD:410721 191/428 (45%)
cyp4v2bNP_001073465.2 None

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