DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4s3 and cyp4v2a

DIOPT Version :10

Sequence 1:NP_573003.2 Gene:Cyp4s3 / 32444 FlyBaseID:FBgn0030615 Length:495 Species:Drosophila melanogaster
Sequence 2:NP_001071070.1 Gene:cyp4v2a / 558851 ZFINID:ZDB-GENE-061103-601 Length:513 Species:Danio rerio


Alignment Length:494 Identity:198/494 - (40%)
Similarity:292/494 - (59%) Gaps:33/494 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 VLWAAFLRYLPKILNFLRLQRFAKTLPG-----PTIGELIANVKKG----EILNWLKELREKHGP 65
            |:..|::.| ..:.::|...:..|.:||     |.||..:.....|    :::.:..|.  ::.|
Zfish    19 VICFAYITY-QLLKSYLHKWKELKPIPGIGNTFPFIGNALQFKSNGDFFLQLVGYTTEF--QNSP 80

  Fly    66 VFRIWFGKDLMVMFTDPEDIKQLLGNNQLLTKSRNYELLEPWLGKGLLTNGGESWHRRRKLLTPG 130
            :.:||.|....::....|.::.:|.|...:.|:..|:.|.||||.||||:.|:.|.||||:|||.
Zfish    81 LLKIWIGPIPFLILFHAETVETVLNNPVHIDKAYAYQFLHPWLGTGLLTSTGDKWRRRRKMLTPT 145

  Fly   131 FHFRILSEFKEPMEENCRILVRRLRTKANGESFDIYPYITLFALDAICETAMGIKKHAQLQSDSE 195
            |||.||:||.|.|.|...:|:.:|..:|....|:.:.:|||.|||.|||||||.:.:||...|||
Zfish   146 FHFSILTEFLEVMNEQAEVLIEKLEKQAGKGPFNCFSHITLCALDIICETAMGKRIYAQSNYDSE 210

  Fly   196 YVQAVQSICRVMHKQSFSFWQRLNVFFKHTKPGKEREAALKVLHDETNRVIRLRREQLIQERNEW 260
            ||:.|..:..::.::....|...:..:.:...|:|...:||:||..|        |.:|.||.|:
Zfish   211 YVRTVYRMSDIITRRQRMPWYWPDFVYNYVGEGREHNRSLKILHSFT--------ESVINERAEY 267

  Fly   261 KPEAEQD---DVGAKRRLAFLDMLLLTQMEGGAELSDTDIREEVDTFMFEGHDTTSSAIAFALSL 322
            ....|.|   |.|.::|.|||||||.|:.|.|..|:..||:||||||||||||||::|:.:|:.|
Zfish   268 LSYVESDSESDQGMRKRRAFLDMLLKTKDEDGKMLTHKDIQEEVDTFMFEGHDTTAAAMNWAIHL 332

  Fly   323 LSKNPDVQQRAFEEASELEGREK--------ESMPYLEAVIKETLRIYPSVPFFSRKVLEDLEVG 379
            |..:|:||::|.:|..|:.|..:        :.:.|||.||||:||::||||||:|.:.:|.::.
Zfish   333 LGSHPEVQRKAQQELFEVFGESERPVNTEDLKKLRYLECVIKESLRLFPSVPFFARTICDDTQIN 397

  Fly   380 KLTVPKGASISCLIYMLHRDPKNFPDPERFDPDRFL-VNEKQMHPFAFAAFSAGPRNCIGQKFAM 443
            ...||||.:|..:.|.|||||:.|||||.|.|:||| .|....||:|:..||||.||||||:||:
Zfish   398 GFKVPKGTNIVVITYALHRDPRFFPDPEEFRPERFLPENCVGRHPYAYIPFSAGLRNCIGQRFAI 462

  Fly   444 LELKTSLAMLLRSYRFLP-DKDHQPKPLAELVTKSGNGI 481
            :|.|..||.:||.:..:. .|..:.:||.|||.:...||
Zfish   463 MEEKVILAYILRYFNIVACQKREELRPLGELVLRPEQGI 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4s3NP_573003.2 CYP4 64..483 CDD:410721 186/431 (43%)
cyp4v2aNP_001071070.1 cytochrome_P450 68..503 CDD:477761 187/444 (42%)

Return to query results.
Submit another query.