DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4s3 and cyp4b1.2

DIOPT Version :9

Sequence 1:NP_573003.2 Gene:Cyp4s3 / 32444 FlyBaseID:FBgn0030615 Length:495 Species:Drosophila melanogaster
Sequence 2:NP_001017348.1 Gene:cyp4b1.2 / 550102 XenbaseID:XB-GENE-963387 Length:515 Species:Xenopus tropicalis


Alignment Length:499 Identity:180/499 - (36%)
Similarity:274/499 - (54%) Gaps:35/499 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LALVAFVLWAAFLRYLPKILNFLRLQRFAKTL---PGPTIGELIANV----KKGEILNWLKELRE 61
            |..|..:|..|:..|       .|.:|||..|   |||....|..:|    :.|:.|:.|.....
 Frog    27 LLCVVLLLLKAYALY-------SRGRRFAAALVPFPGPPAHWLYGHVNQFRRDGKDLDRLMVWVN 84

  Fly    62 KHGPVFRIWFGKDL-MVMFTDPEDIKQLLGNNQLLTKSRNYELLEPWLGKGLLTNGGESWHRRRK 125
            |:...|.:|.||.. .::.|||:..|.:.|.:...| |..|..|.||:|||||...|.:|.:.|:
 Frog    85 KYPNAFPLWIGKFFGTLIITDPDYAKVVFGRSDPKT-STGYNFLVPWIGKGLLILSGNTWFQHRR 148

  Fly   126 LLTPGFHFRILSEFKEPMEENCRILVRRLRTKAN-GESFDIYPYITLFALDAICETAMGIKKHAQ 189
            |:|||||:.:|..:...:.::.:|::..|...:| .||.:::.:::|..||:|.:.|.....:.|
 Frog   149 LITPGFHYDVLKPYVSLISDSTKIMLDELDVYSNKDESVELFQHVSLMTLDSIMKCAFSYHSNCQ 213

  Fly   190 LQSDSEYVQAVQSICRVMHKQSFSFWQRLNVFFKHTKPGKEREAALKVLHDETNRVIRLRREQLI 254
            ...|::|:|||..:..:..::..:|....|:.:..:..|.....|.:::|..|::||..|::.| 
 Frog   214 TDKDNDYIQAVYDLSWLTQQRIRTFPYHSNLIYFLSPHGFRFRKACRIVHLHTDKVIGQRKKLL- 277

  Fly   255 QERNEWKPEAEQDDVGAKRRLAFLDMLLLTQMEGGAELSDTDIREEVDTFMFEGHDTTSSAIAFA 319
                |.|.|.|:  |..||.|.|||:||.::.|.|..||..|:|.|||||||||||||||.|::.
 Frog   278 ----ESKEELEK--VQKKRHLDFLDILLCSKDENGQGLSHEDLRAEVDTFMFEGHDTTSSGISWI 336

  Fly   320 LSLLSKNPDVQQRAFEEASE-------LEGREKESMPYLEAVIKETLRIYPSVPFFSRKVLEDLE 377
            |..::.:|:.||:..||.||       :|..:...|||....|||:||:||.||..||::.:.:.
 Frog   337 LYCMATHPEHQQKCREEISEALGERQTMEWDDLNRMPYTTMCIKESLRLYPPVPSVSRELAKPIT 401

  Fly   378 V--GKLTVPKGASISCLIYMLHRDPKNFPDPERFDPDRFL-VNEKQMHPFAFAAFSAGPRNCIGQ 439
            .  |: ::|.|..:|..||.:||:|..:.|||.|||.||. .|..:.|..||..|:|||||||||
 Frog   402 FHDGR-SLPAGMLVSLQIYAIHRNPNVWKDPEIFDPLRFSPENSSKRHSHAFVPFAAGPRNCIGQ 465

  Fly   440 KFAMLELKTSLAMLLRSYRFLPDKDHQPKPLAELVTKSGNGIRL 483
            .|||.|:|.::|:.|:.:...||....|....:||.:|.|||.:
 Frog   466 NFAMNEMKVAVALTLKRFELSPDLSKPPLKQPQLVLRSKNGIHV 509

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4s3NP_573003.2 p450 35..469 CDD:278495 165/452 (37%)
cyp4b1.2NP_001017348.1 p450 55..508 CDD:278495 169/461 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X23
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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