DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4s3 and cyp4b1.2

DIOPT Version :10

Sequence 1:NP_573003.2 Gene:Cyp4s3 / 32444 FlyBaseID:FBgn0030615 Length:495 Species:Drosophila melanogaster
Sequence 2:NP_001017348.1 Gene:cyp4b1.2 / 550102 XenbaseID:XB-GENE-963387 Length:515 Species:Xenopus tropicalis


Alignment Length:499 Identity:180/499 - (36%)
Similarity:274/499 - (54%) Gaps:35/499 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LALVAFVLWAAFLRYLPKILNFLRLQRFAKTL---PGPTIGELIANV----KKGEILNWLKELRE 61
            |..|..:|..|:..|       .|.:|||..|   |||....|..:|    :.|:.|:.|.....
 Frog    27 LLCVVLLLLKAYALY-------SRGRRFAAALVPFPGPPAHWLYGHVNQFRRDGKDLDRLMVWVN 84

  Fly    62 KHGPVFRIWFGKDL-MVMFTDPEDIKQLLGNNQLLTKSRNYELLEPWLGKGLLTNGGESWHRRRK 125
            |:...|.:|.||.. .::.|||:..|.:.|.:...| |..|..|.||:|||||...|.:|.:.|:
 Frog    85 KYPNAFPLWIGKFFGTLIITDPDYAKVVFGRSDPKT-STGYNFLVPWIGKGLLILSGNTWFQHRR 148

  Fly   126 LLTPGFHFRILSEFKEPMEENCRILVRRLRTKAN-GESFDIYPYITLFALDAICETAMGIKKHAQ 189
            |:|||||:.:|..:...:.::.:|::..|...:| .||.:::.:::|..||:|.:.|.....:.|
 Frog   149 LITPGFHYDVLKPYVSLISDSTKIMLDELDVYSNKDESVELFQHVSLMTLDSIMKCAFSYHSNCQ 213

  Fly   190 LQSDSEYVQAVQSICRVMHKQSFSFWQRLNVFFKHTKPGKEREAALKVLHDETNRVIRLRREQLI 254
            ...|::|:|||..:..:..::..:|....|:.:..:..|.....|.:::|..|::||..|::.| 
 Frog   214 TDKDNDYIQAVYDLSWLTQQRIRTFPYHSNLIYFLSPHGFRFRKACRIVHLHTDKVIGQRKKLL- 277

  Fly   255 QERNEWKPEAEQDDVGAKRRLAFLDMLLLTQMEGGAELSDTDIREEVDTFMFEGHDTTSSAIAFA 319
                |.|.|.|:  |..||.|.|||:||.::.|.|..||..|:|.|||||||||||||||.|::.
 Frog   278 ----ESKEELEK--VQKKRHLDFLDILLCSKDENGQGLSHEDLRAEVDTFMFEGHDTTSSGISWI 336

  Fly   320 LSLLSKNPDVQQRAFEEASE-------LEGREKESMPYLEAVIKETLRIYPSVPFFSRKVLEDLE 377
            |..::.:|:.||:..||.||       :|..:...|||....|||:||:||.||..||::.:.:.
 Frog   337 LYCMATHPEHQQKCREEISEALGERQTMEWDDLNRMPYTTMCIKESLRLYPPVPSVSRELAKPIT 401

  Fly   378 V--GKLTVPKGASISCLIYMLHRDPKNFPDPERFDPDRFL-VNEKQMHPFAFAAFSAGPRNCIGQ 439
            .  |: ::|.|..:|..||.:||:|..:.|||.|||.||. .|..:.|..||..|:|||||||||
 Frog   402 FHDGR-SLPAGMLVSLQIYAIHRNPNVWKDPEIFDPLRFSPENSSKRHSHAFVPFAAGPRNCIGQ 465

  Fly   440 KFAMLELKTSLAMLLRSYRFLPDKDHQPKPLAELVTKSGNGIRL 483
            .|||.|:|.::|:.|:.:...||....|....:||.:|.|||.:
 Frog   466 NFAMNEMKVAVALTLKRFELSPDLSKPPLKQPQLVLRSKNGIHV 509

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4s3NP_573003.2 CYP4 64..483 CDD:410721 161/430 (37%)
cyp4b1.2NP_001017348.1 CYP4B-like 76..510 CDD:410771 164/443 (37%)

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