DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4s3 and Cyp4f40

DIOPT Version :10

Sequence 1:NP_573003.2 Gene:Cyp4s3 / 32444 FlyBaseID:FBgn0030615 Length:495 Species:Drosophila melanogaster
Sequence 2:NP_001102830.1 Gene:Cyp4f40 / 503122 RGDID:1559596 Length:523 Species:Rattus norvegicus


Alignment Length:468 Identity:162/468 - (34%)
Similarity:253/468 - (54%) Gaps:50/468 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 ELIANVKKGEILNWLKELREKHGPVFRIWFGKDLMVMFTDPEDIKQLLGNNQLLTKSRN--YELL 104
            ||:|...:| .:.||       ||:..       ::....|:.|:.:|..:..:.....  |..|
  Rat    79 ELVATYPQG-FMTWL-------GPIVP-------LITLCHPDIIRSVLSASAAVAPKDGIFYSFL 128

  Fly   105 EPWLGKGLLTNGGESWHRRRKLLTPGFHFRILSEFKEPMEENCRIL-VRRLRTKANGES-FDIYP 167
            :||||.|||.:..:.|.|.|.:|||.|||.||..:.:...::..|: .:.||..:.|.: .|::.
  Rat   129 KPWLGDGLLVSASDKWSRHRSMLTPAFHFNILKPYVKIFNDSTNIMHAKWLRLASGGSAHLDMFE 193

  Fly   168 YITLFALDAICETAMGIKKHAQLQSDSEYVQAVQSICRVMHKQSFSFWQRLNVFFKHTKPGKERE 232
            .|:|..||.:.:.......:.| :..|||:.|:..:..::.|::......:::.::.|..|:...
  Rat   194 NISLMTLDTLQKCVFSFNSNCQ-EKPSEYIAAILELSALVVKRNEQLLLHMDLLYRLTPDGRRFY 257

  Fly   233 AALKVLHDETNRVIRLRREQLIQERNEWKPEAEQDDV----GAKRRLAFLDMLLLTQMEGGAELS 293
            .|..::||.|..|        ||||....|:...|||    ...:.|.|:|:|||::.|.|.|||
  Rat   258 KACHLVHDFTYAV--------IQERRRTLPKHGGDDVIKAKAKSKTLDFIDVLLLSKDEDGKELS 314

  Fly   294 DTDIREEVDTFMFEGHDTTSSAIAFALSLLSKNPDVQQRAFEEASE-LEGREKE--------SMP 349
            |.|||.|.|||||||||||:|.:::.|..|:|:|:.|:|..:|..| |..|:.|        .:|
  Rat   315 DEDIRAEADTFMFEGHDTTASGLSWILYNLAKHPEYQERCRQEVQELLRDRDSEEIEWDDLAQLP 379

  Fly   350 YLEAVIKETLRIYPSVPFFSRKVLEDLEV--GKLTVPKGASISCL--IYMLHRDPKNFPDPERFD 410
            :|...|||:||::|.|...||...:|:.:  |:: :|||  |.|:  |:..|.:|..:.|||.:|
  Rat   380 FLTMCIKESLRLHPPVTMVSRCCTQDISLPDGRV-IPKG--IICIINIFATHHNPTVWQDPEVYD 441

  Fly   411 PDRF-LVNEKQMHPFAFAAFSAGPRNCIGQKFAMLELKTSLAMLLRSYRFLPDKDHQPKPLAELV 474
            |.|| ..|.:...|.||..|||||||||||.|||.|:|.::|:.|..:|.||| |.:|:...||:
  Rat   442 PFRFDPENIQARSPLAFIPFSAGPRNCIGQTFAMNEMKVAVALTLLRFRVLPD-DKEPRRKPELI 505

  Fly   475 TKSGNGIRLRILP 487
            .::.:|:.||:.|
  Rat   506 LRAEDGLWLRVEP 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4s3NP_573003.2 CYP4 64..483 CDD:410721 153/440 (35%)
Cyp4f40NP_001102830.1 CYP4F 74..515 CDD:410772 159/463 (34%)

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