DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4s3 and Cyp4f40

DIOPT Version :9

Sequence 1:NP_573003.2 Gene:Cyp4s3 / 32444 FlyBaseID:FBgn0030615 Length:495 Species:Drosophila melanogaster
Sequence 2:XP_038935701.1 Gene:Cyp4f40 / 503122 RGDID:1559596 Length:530 Species:Rattus norvegicus


Alignment Length:475 Identity:162/475 - (34%)
Similarity:253/475 - (53%) Gaps:57/475 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 ELIANVKKGEILNWLKELREKHGPVFRIWFGKDLMVMFTDPEDIKQLLGNNQLLTKSRN--YELL 104
            ||:|...:| .:.||       ||:..       ::....|:.|:.:|..:..:.....  |..|
  Rat    79 ELVATYPQG-FMTWL-------GPIVP-------LITLCHPDIIRSVLSASAAVAPKDGIFYSFL 128

  Fly   105 EPWLGKGLLTNGGESWHRRRKLLTPGFHFRILSEFKEPMEENCRIL-VRRLRTKANGES-FDIYP 167
            :||||.|||.:..:.|.|.|.:|||.|||.||..:.:...::..|: .:.||..:.|.: .|::.
  Rat   129 KPWLGDGLLVSASDKWSRHRSMLTPAFHFNILKPYVKIFNDSTNIMHAKWLRLASGGSAHLDMFE 193

  Fly   168 YITLFALDAICETAMGIKKHAQLQSDSEYVQAVQSICRVMHKQSFSFWQRLNVFFKHTKPGKERE 232
            .|:|..||.:.:.......:.| :..|||:.|:..:..::.|::......:::.::.|..|:...
  Rat   194 NISLMTLDTLQKCVFSFNSNCQ-EKPSEYIAAILELSALVVKRNEQLLLHMDLLYRLTPDGRRFY 257

  Fly   233 AALKVLHDETNRVIRLRREQLIQERNEWKPEAEQDDV----GAKRRLAFLDMLLLTQMEGGAELS 293
            .|..::||.|..|        ||||....|:...|||    ...:.|.|:|:|||::.|.|.|||
  Rat   258 KACHLVHDFTYAV--------IQERRRTLPKHGGDDVIKAKAKSKTLDFIDVLLLSKDEDGKELS 314

  Fly   294 DTDIREEVDTFMFEGHDTTSSAIAFALSLLSKNPDVQQRAFEEASE-LEGREKE----------- 346
            |.|||.|.|||||||||||:|.:::.|..|:|:|:.|:|..:|..| |..|:.|           
  Rat   315 DEDIRAEADTFMFEGHDTTASGLSWILYNLAKHPEYQERCRQEVQELLRDRDSEEIECSCGVLLR 379

  Fly   347 ----SMPYLEAVIKETLRIYPSVPFFSRKVLEDLEV--GKLTVPKGASISCL--IYMLHRDPKNF 403
                .:|:|...|||:||::|.|...||...:|:.:  |:: :|||  |.|:  |:..|.:|..:
  Rat   380 DDLAQLPFLTMCIKESLRLHPPVTMVSRCCTQDISLPDGRV-IPKG--IICIINIFATHHNPTVW 441

  Fly   404 PDPERFDPDRF-LVNEKQMHPFAFAAFSAGPRNCIGQKFAMLELKTSLAMLLRSYRFLPDKDHQP 467
            .|||.:||.|| ..|.:...|.||..|||||||||||.|||.|:|.::|:.|..:|.||| |.:|
  Rat   442 QDPEVYDPFRFDPENIQARSPLAFIPFSAGPRNCIGQTFAMNEMKVAVALTLLRFRVLPD-DKEP 505

  Fly   468 KPLAELVTKSGNGIRLRILP 487
            :...||:.::.:|:.||:.|
  Rat   506 RRKPELILRAEDGLWLRVEP 525

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4s3NP_573003.2 p450 35..469 CDD:278495 156/455 (34%)
Cyp4f40XP_038935701.1 CYP4F 74..522 CDD:410772 159/470 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166348445
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3B9GY
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X23
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.650

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