DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4s3 and Cyp4a30b

DIOPT Version :9

Sequence 1:NP_573003.2 Gene:Cyp4s3 / 32444 FlyBaseID:FBgn0030615 Length:495 Species:Drosophila melanogaster
Sequence 2:XP_006503285.1 Gene:Cyp4a30b / 435802 MGIID:3717145 Length:510 Species:Mus musculus


Alignment Length:497 Identity:165/497 - (33%)
Similarity:261/497 - (52%) Gaps:28/497 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSTLALVAFVLWAAFLRYLPKILNFLRLQRFAKTLPGPTIGELIANVKKGEILNWLKELREKHGP 65
            :|.|.|:..:|.:| ..||.:......||:|.   |.|....|..|..|.:.|..:....||...
Mouse    22 VSLLGLLLLLLKSA-QYYLHRQWLIKSLQQFP---PAPPPQWLFGNTLKDQDLQQILLCVEKFPS 82

  Fly    66 VFRIW-FGKDLMVMFTDPEDIKQLLGNNQLLTKSRNYELLEPWLGKGLLTNGGESWHRRRKLLTP 129
            .:..| :|....|:..||:.:|.:||.:.... .|:|....||:|.|||...|:.|.:.|::|||
Mouse    83 TYVRWLWGNHARVVIYDPDYMKVILGRSDPKV-VRSYSFFAPWIGYGLLLLNGKKWFQHRRMLTP 146

  Fly   130 GFHFRILSEFKEPMEENCRILVRRLRTKANGE-SFDIYPYITLFALDAICETAMGIKKHAQLQ-- 191
            .||:.||..:...|.::..:::.:.....:.: ..:||..|:|..::.:.:.|...:...||:  
Mouse   147 AFHYDILKPYVGIMVDSVHVMLDKWEQLVDQDCPLEIYQDISLMTMETMMKCAFSYQGSVQLEDC 211

  Fly   192 -SDSEYVQAVQSICRVMHKQSFSFWQRLNVFFKHTKPGKEREAALKVLHDETNRVIRLRREQLIQ 255
             :...|::||:.:..:::.:..:.:.:.|..:..:..|:....|.::.|..|.||||:|:.||  
Mouse   212 RNSKSYIKAVEDLTHLIYLRVRNGFHQNNTIYSLSSNGRSFYHACQIAHKHTERVIRMRKAQL-- 274

  Fly   256 ERNEWKPEAEQDDVGAKRRLAFLDMLLLTQMEGGAELSDTDIREEVDTFMFEGHDTTSSAIAFAL 320
                 :.|||.:....|:||.|||:||..|.|.|..|||.|:|.|:||||||||:||:|.|::..
Mouse   275 -----QNEAELEKFRKKKRLDFLDILLFAQTEDGKSLSDEDVRAEMDTFMFEGHNTTASGISWIF 334

  Fly   321 SLLSKNPDVQQRAFEEASELEG-------REKESMPYLEAVIKETLRIYPSVPFFSRKVLEDLEV 378
            ..|:.:|:.|||..||...:.|       ...:.|||....|||.||:||.:|..||::...:..
Mouse   335 YALATHPEHQQRCREEVKSILGNGTSVTLNHLDQMPYTTMCIKEALRLYPPIPGASRELSSPVTF 399

  Fly   379 -GKLTVPKGASISCLIYMLHRDPKNFPDPERFDPDRFLVN-EKQMHPFAFAAFSAGPRNCIGQKF 441
             ...::|||..::...|.||.:|:..|:.|.|||.||... .:|.|  ||..||||.|||||::|
Mouse   400 PDGCSLPKGFLVTLSFYGLHHNPRLRPNAEVFDPSRFAPGAPRQTH--AFLPFSAGTRNCIGKQF 462

  Fly   442 AMLELKTSLAMLLRSYRFLPDKDHQPKPLAELVTKSGNGIRL 483
            .|.|||.::|:.|..:..|||....|..::::|.||.|||.|
Mouse   463 TMNELKVAVALTLLRFELLPDPTRVPILVSKIVLKSKNGIYL 504

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4s3NP_573003.2 p450 35..469 CDD:278495 148/447 (33%)
Cyp4a30bXP_006503285.1 p450 59..504 CDD:365848 152/454 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167844981
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3B9GY
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X23
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.650

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