DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4s3 and cyp46a1.2

DIOPT Version :10

Sequence 1:NP_573003.2 Gene:Cyp4s3 / 32444 FlyBaseID:FBgn0030615 Length:495 Species:Drosophila melanogaster
Sequence 2:NP_956755.3 Gene:cyp46a1.2 / 393433 ZFINID:ZDB-GENE-040426-1184 Length:501 Species:Danio rerio


Alignment Length:529 Identity:140/529 - (26%)
Similarity:236/529 - (44%) Gaps:97/529 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LALVAFVLWAAFLRYLPKILNFLRLQRFAKTLPGP-----TIG-------------ELIANVKKG 50
            |.::.::|.|.|..:|...|....|.:....:|||     .:|             .||.::   
Zfish     7 LYIIFYLLSAVFTAFLAYCLYIHHLHQKYDHIPGPPRDNFLLGHSPSLTKAMYSDDSLIHDL--- 68

  Fly    51 EILNWLKELREKHGPVFRIWFGKDLMVMFTDPEDIKQLLGNNQLLTKSRNYELLEPWLGKGLLTN 115
             .|.|    .|::|||:||.....:.::...||..|.:|.:.:......:|..|....||..|.|
Zfish    69 -FLQW----AEQYGPVYRINTLHYIAIVVHCPEATKTILMSPKYAKDPFSYSRLFNLFGKRFLGN 128

  Fly   116 G------GESWHRRRKLLTPGFHFRILSEFKEPMEENCRILVRRLRTKANGESFDI-YPYITLFA 173
            |      .:.|:|:|:::.|.|....|.......:|....|:.:|...||.::..: :..:....
Zfish   129 GLVTAVDHDIWYRQRRIMDPAFSSSYLRSLISTFDEMSERLMDKLEEMANNKTPAVMHDLVNCVT 193

  Fly   174 LDAICETAMGIKKHAQLQSDSEYVQAVQSIC-------------RVMHKQSFSFWQRLNVFFKHT 225
            ||.||:.|.|:..:...|.||.:..||: :|             |:..|.    |:.:.      
Zfish   194 LDVICKVAFGVDLNFLAQKDSPFQNAVE-LCLNGMALDARDPLFRIFPKN----WKLIQ------ 247

  Fly   226 KPGKEREAALKVLHDETNRVIRLRREQLIQERNEWKPEAEQDDVGAKRRLAFLDMLLLTQMEGGA 290
               :.|:||:         ::|...|:.||.|.......|  ||...         :|||:...|
Zfish   248 ---QIRDAAV---------LLRKTGEKWIQNRKTAVKNGE--DVPKD---------ILTQILKIA 289

  Fly   291 ELSDTDIREEVD-------TFMFEGHDTTSSAIAFALSLLSKNPDVQQRAFEEASELEGREKE-- 346
            |..:.:..|:::       ||...|.:||::.::||:..|.:||::.:||..|..|:.|.::|  
Zfish   290 EEENVNSSEDLEQMMDNFVTFFIAGQETTANQLSFAIMALGRNPEIYKRAKAEVDEVLGTKREIS 354

  Fly   347 -----SMPYLEAVIKETLRIYPSVPFFSRKVLEDLEVGKLTVPKGASISCLIYMLHRDPKNFPDP 406
                 .:.||..|:|||||:||:.|..:|.:.||:.:..:.:|.|.|:....::..|..|.|.||
Zfish   355 NEDLGKLTYLSQVLKETLRLYPTAPGTNRWLHEDMIINGIKIPGGCSVMFSSFVSQRLEKFFKDP 419

  Fly   407 ERFDPDRFLVNEKQMHPFAFAAFSAGPRNCIGQKFAMLELKTSLAMLLRSYRF--LPDKDHQPKP 469
            .:|||:||..|..:.: :.:..|:.|||.|:||.|:.:|.|..||.||:.:.|  :|.:....|.
Zfish   420 LKFDPERFDENAPKPY-YCYYPFALGPRTCLGQVFSQMEAKVVLAKLLQRFEFSLVPGQSFDIKD 483

  Fly   470 LAELVTKSG 478
            ...|..|||
Zfish   484 TGTLRPKSG 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4s3NP_573003.2 CYP4 64..483 CDD:410721 124/451 (27%)
cyp46a1.2NP_956755.3 None

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