DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4s3 and cyp46a1.2

DIOPT Version :9

Sequence 1:NP_573003.2 Gene:Cyp4s3 / 32444 FlyBaseID:FBgn0030615 Length:495 Species:Drosophila melanogaster
Sequence 2:XP_009292815.1 Gene:cyp46a1.2 / 393433 ZFINID:ZDB-GENE-040426-1184 Length:501 Species:Danio rerio


Alignment Length:529 Identity:140/529 - (26%)
Similarity:236/529 - (44%) Gaps:97/529 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LALVAFVLWAAFLRYLPKILNFLRLQRFAKTLPGP-----TIG-------------ELIANVKKG 50
            |.::.::|.|.|..:|...|....|.:....:|||     .:|             .||.::   
Zfish     7 LYIIFYLLSAVFTAFLAYCLYIHHLHQKYDHIPGPPRDNFLLGHSPSLTKAMYSDDSLIHDL--- 68

  Fly    51 EILNWLKELREKHGPVFRIWFGKDLMVMFTDPEDIKQLLGNNQLLTKSRNYELLEPWLGKGLLTN 115
             .|.|    .||:|||:||.....:.::...||..|.:|.:.:......:|..|....||..|.|
Zfish    69 -FLQW----AEKYGPVYRINTLHYIAILVHCPEATKTILMSPKYAKDPFSYSRLFNLFGKRFLGN 128

  Fly   116 G------GESWHRRRKLLTPGFHFRILSEFKEPMEENCRILVRRLRTKANGESFDI-YPYITLFA 173
            |      .:.|:|:|:::.|.|....|.......:|....|:.:|...||.::..: :..:....
Zfish   129 GLVTAVDHDIWYRQRRIMDPAFSSSYLRSLISTFDEMSERLMDKLEEMANNKTPAVMHDLVNCVT 193

  Fly   174 LDAICETAMGIKKHAQLQSDSEYVQAVQSIC-------------RVMHKQSFSFWQRLNVFFKHT 225
            ||.||:.|.|:..:...|.||.:..|:: :|             |:..|.    |:.:.      
Zfish   194 LDVICKVAFGVDLNFLTQKDSPFQNAIE-LCLNGMALDARDPLFRIFPKN----WKLIQ------ 247

  Fly   226 KPGKEREAALKVLHDETNRVIRLRREQLIQERNEWKPEAEQDDVGAKRRLAFLDMLLLTQMEGGA 290
               :.|:||:         ::|...|:.||.|.......|  ||...         :|||:...|
Zfish   248 ---QIRDAAV---------LLRKTGEKWIQNRKTAVKNGE--DVPKD---------ILTQILKIA 289

  Fly   291 ELSDTDIREEVD-------TFMFEGHDTTSSAIAFALSLLSKNPDVQQRAFEEASELEGREKE-- 346
            |..:.:..|:::       ||...|.:||::.::||:..|.:||::.:||..|..|:.|.::|  
Zfish   290 EEENVNSSEDLEQMMDNFVTFFIAGQETTANQLSFAIMALGRNPEIYKRAKAEVDEVLGTKREIS 354

  Fly   347 -----SMPYLEAVIKETLRIYPSVPFFSRKVLEDLEVGKLTVPKGASISCLIYMLHRDPKNFPDP 406
                 .:.||..|:|||||:||:.|..:|.:.||:.:..:.:|.|.|:....::..|..|.|.||
Zfish   355 NEDLGKLTYLSQVLKETLRLYPTAPGTNRWLHEDMIINGIKIPGGCSVMFSSFVSQRLEKFFKDP 419

  Fly   407 ERFDPDRFLVNEKQMHPFAFAAFSAGPRNCIGQKFAMLELKTSLAMLLRSYRF--LPDKDHQPKP 469
            .:|||:||..|..:.: :.:..|:.|||.|:||.|:.:|.|..||.||:.:.|  :|.:....|.
Zfish   420 LKFDPERFDENAPKPY-YCYYPFALGPRTCLGQVFSQMEAKVVLAKLLQRFEFSLVPGQSFDIKD 483

  Fly   470 LAELVTKSG 478
            ...|..|||
Zfish   484 TGTLRPKSG 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4s3NP_573003.2 p450 35..469 CDD:278495 128/487 (26%)
cyp46a1.2XP_009292815.1 p450 39..495 CDD:278495 133/497 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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