DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4s3 and Cyp4aa1

DIOPT Version :10

Sequence 1:NP_573003.2 Gene:Cyp4s3 / 32444 FlyBaseID:FBgn0030615 Length:495 Species:Drosophila melanogaster
Sequence 2:NP_611067.2 Gene:Cyp4aa1 / 36752 FlyBaseID:FBgn0034053 Length:510 Species:Drosophila melanogaster


Alignment Length:507 Identity:160/507 - (31%)
Similarity:252/507 - (49%) Gaps:47/507 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LALVAFVLWAAFLRYLPKILNFLRLQRFAKTLPG--PTIGELIANVKKGEILNWLKELREKHGPV 66
            ::|..:..:|....||..:|..|||     |.|.  |.:|..:....|..:.....:..:.:|.:
  Fly    24 ISLSIYTFYATLNTYLRSVLLSLRL-----TGPPSLPFLGNCMLVTDKDLMRRCAGKAFDLYGSL 83

  Fly    67 FRIWFGKDLMVMF---TDPEDIKQLLGNNQLLTKSRNYELLEPWLGKGLLTNGGESWHRRRKLLT 128
            .|||.   |:..|   .:|||::.:|.:.:...|...|.|:..:||.||:|:.|..|...|:|:.
  Fly    84 VRIWV---LLFPFFAVLEPEDLQVILSSKKHTNKVFFYRLMHNFLGDGLITSSGSKWSNHRRLIQ 145

  Fly   129 PGFHFRILSEFKEPMEENCRILVRRLRTKANGESFDIYPYITLFALDAICETAMG--IKKHAQ-- 189
            |.||..:|.:|.:...:..:.|...|..:|.|...:|..|:....||.:.|..:|  |||..|  
  Fly   146 PAFHHNLLEKFIDTFVDASQSLYENLDAEAVGTEINIAKYVNNCVLDILNEAVLGVPIKKRGQDV 210

  Fly   190 -LQSDSEYVQAVQSICRVMHKQSFSF-WQRLNVFFKHTKPGKEREAALKVLHDETNRVIRLRREQ 252
             :..||.:.|.     ::|....|:. |..|:..:..||...:.....|.|:|.|.::|:.||: 
  Fly   211 AMMEDSPFRQG-----KIMMPARFTQPWLLLDGIYHWTKMANDELNQKKRLNDFTRKMIQRRRQ- 269

  Fly   253 LIQERNEWKPEAEQDDVGAKRRLAFLDMLLLTQMEGGAELSDTDIREEVDTFMFEGHDTTSSAIA 317
             ||..|.          |...|...||.::... |...:.::.||..|..|||..|.|:..:|:|
  Fly   270 -IQNNNN----------GNSERKCLLDHMIEIS-ESNRDFTEEDIVNEACTFMLAGQDSVGAAVA 322

  Fly   318 FALSLLSKNPDVQQRA-------FEEASELEG-REKESMPYLEAVIKETLRIYPSVPFFSRKVLE 374
            |.|.||::||:.|.|.       ||:::.... .:...|.|:|..|||.||:|||||..:||:.|
  Fly   323 FTLFLLTQNPECQDRCVLELATIFEDSNRAPTMTDLHEMRYMEMCIKEALRLYPSVPLIARKLGE 387

  Fly   375 DLEVGKLTVPKGASISCLIYMLHRDPKNFPDPERFDPDRFL-VNEKQMHPFAFAAFSAGPRNCIG 438
            ::.:.|.|:|.|:::....|..||....:||||:|.|:||. .|.:..||:||..||||||.|||
  Fly   388 EVRLAKHTLPAGSNVFICPYATHRLAHIYPDPEKFQPERFSPENSENRHPYAFLPFSAGPRYCIG 452

  Fly   439 QKFAMLELKTSLAMLLRSYRFLPDKDHQPKPLAELVT-KSGNGIRLRILPRD 489
            .:||::|:||.::.|||||:.||............:| ::..|:.:|:..||
  Fly   453 NRFAIMEIKTIVSRLLRSYQLLPVTGKTTIAATFRITLRASGGLWVRLKERD 504

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4s3NP_573003.2 CYP4 64..483 CDD:410721 144/437 (33%)
Cyp4aa1NP_611067.2 CYP4 81..498 CDD:410721 144/437 (33%)

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