DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4s3 and Cyp4f39

DIOPT Version :9

Sequence 1:NP_573003.2 Gene:Cyp4s3 / 32444 FlyBaseID:FBgn0030615 Length:495 Species:Drosophila melanogaster
Sequence 2:XP_006241152.1 Gene:Cyp4f39 / 299566 RGDID:1308796 Length:550 Species:Rattus norvegicus


Alignment Length:518 Identity:177/518 - (34%)
Similarity:273/518 - (52%) Gaps:51/518 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 ALVAFVLWAAFLRYLP--KILNFLRLQ-RFAKTLPGP-----TIGEL---IANVKKGEILNWLKE 58
            ||:.|:|:..|...|.  |:.:..|:. |.....|.|     .:|.:   :.| :|| :.|..|.
  Rat    26 ALLLFLLFLLFRLLLQAFKLFSDFRITCRRLSCFPEPPGRHWLLGHMSMYLPN-EKG-LQNEKKV 88

  Fly    59 LREKHGPVFRIWFGKDL-MVMFTDPEDIKQLLGNNQLLTKSRN--YELLEPWLGKGLLTNGGESW 120
            |...| .:...|.|..| :::...|:.||.:||.:..:.....  |..|:||||.|||.:.|..|
  Rat    89 LDTMH-HIILAWVGPFLPLLVLVHPDYIKPVLGASAAIAPKDEFFYSFLKPWLGDGLLISKGNKW 152

  Fly   121 HRRRKLLTPGFHFRILSEFKEPMEENCRIL---VRRLRTKANGESFDIYPYITLFALDAICETAM 182
            .|.|:||||.|||.||..:.:...::..|:   .||...:.:..|||::.:::|..||::.:...
  Rat   153 SRHRRLLTPAFHFDILKPYMKIFNQSVNIMHAKWRRHLAEGSVTSFDMFEHVSLMTLDSLQKCVF 217

  Fly   183 GIKKHAQLQSDSEYVQAVQSICRVMHKQSFSFWQRLNVFFKHTKPGKEREAALKVLHDETNRVIR 247
            ......| :..|:|:.::..:..::.::.:.....|:..:..|..|:....|...:|:.|..||:
  Rat   218 SYSSDCQ-EKLSDYISSIIELSALVVRRQYRLHHYLDFIYYLTADGRRFRQACDTVHNFTTEVIQ 281

  Fly   248 LRREQLIQERNEWKPEAEQDDVGAKRRLAFLDMLLLTQMEGGAELSDTDIREEVDTFMFEGHDTT 312
            .||..|.:...|...:|:|.     :.|.|:|:|||.:.|.|.||||.|||.|.|||||||||||
  Rat   282 QRRRALRELGAEAWLKAKQG-----KTLDFIDVLLLAKDEEGKELSDEDIRAEADTFMFEGHDTT 341

  Fly   313 SSAIAFALSLLSKNPDVQQRAFEEASE-LEGREKE--------SMPYLEAVIKETLRIYPSVPFF 368
            ||.:::||..|:|.|:.|.:..||..| ::|||.|        .:|:....|||:||.:|.|...
  Rat   342 SSGLSWALFNLAKYPEYQDKCREEIQEVMKGRELEELDWDDLTQLPFTTMCIKESLRQFPPVTLI 406

  Fly   369 SRKVLEDLEV--GKLTVPKGASISCL--IYMLHRDPKNFPD-----PERFDPDRFLVNEKQMHPF 424
            ||:..||:::  |:: :|||  |.||  ||..|.:|..:||     |.|||||    ..:|..|.
  Rat   407 SRRCTEDIKLPDGRI-IPKG--IICLVSIYGTHYNPLVWPDSKVYNPYRFDPD----IPQQRSPL 464

  Fly   425 AFAAFSAGPRNCIGQKFAMLELKTSLAMLLRSYRFLPDKDHQPKPLAELVTKSGNGIRLRILP 487
            ||..|||||||||||.|||.|::..:|:.|..:|...|:..:.:...||:.::.||:.|.:.|
  Rat   465 AFVPFSAGPRNCIGQSFAMAEMRVVVALTLLRFRLSVDRTRKVRRKPELILRTENGLWLNVEP 527

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4s3NP_573003.2 p450 35..469 CDD:278495 162/465 (35%)
Cyp4f39XP_006241152.1 CYP4F 82..523 CDD:410772 160/454 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166348368
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3B9GY
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X23
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.650

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