DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4s3 and Cyp4a8

DIOPT Version :10

Sequence 1:NP_573003.2 Gene:Cyp4s3 / 32444 FlyBaseID:FBgn0030615 Length:495 Species:Drosophila melanogaster
Sequence 2:NP_113793.2 Gene:Cyp4a8 / 266674 RGDID:628846 Length:508 Species:Rattus norvegicus


Alignment Length:435 Identity:161/435 - (37%)
Similarity:244/435 - (56%) Gaps:36/435 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 IWFGKDLMVMFTDPEDIKQLLGNNQLLTKS-RNYELLEPWLGKGLLTNGGESWHRRRKLLTPGFH 132
            :| |.::.:...||:.:|.:||.:.  .|| .:|..|.||:|.|||...|::|.:.|::|||.||
  Rat    88 LW-GSNVRIQVYDPDYMKLILGRSD--PKSHHSYRFLAPWIGYGLLLLNGQTWFQHRRMLTPAFH 149

  Fly   133 FRILSEFKEPMEENCRILVRRLRTKANGES-FDIYPYITLFALDAICETAMGIKKHAQL-QSDSE 195
            :..|..:...|.::.||::.:.......:| .:|:.:|||..||.|.:.|...:...|| :....
  Rat   150 YDTLKPYVGIMADSVRIMLDKWEQIVGQDSTLEIFQHITLMTLDTIMKCAFSQEGSVQLDRKYKS 214

  Fly   196 YVQAVQSICRVMHKQSFSFWQRLNVFFKH------TKPGKEREAALKVLHDETNRVIRLRREQLI 254
            |::||:.:      .:.||::..|:|.::      :..|::..:|.::.|:.|::||:.|:.|| 
  Rat   215 YIKAVEDL------NNLSFFRIRNIFHQNDIIYSLSSNGRKARSAWQLAHEHTDQVIKSRKAQL- 272

  Fly   255 QERNEWKPEAEQDDVGAKRRLAFLDMLLLTQMEGGAELSDTDIREEVDTFMFEGHDTTSSAIAFA 319
                  :.|.|...|..||||.|||:||..::|.|:.|||.|:|.|||||||||||||:|.|::.
  Rat   273 ------QDEEELQKVKQKRRLDFLDILLFARIENGSSLSDKDLRAEVDTFMFEGHDTTASGISWI 331

  Fly   320 LSLLSKNPDVQQRAFEEASELEG-------REKESMPYLEAVIKETLRIYPSVPFFSRKVLEDLE 377
            ...|:.||:.||...:|...|.|       .:.:.|||....|||.|||||.|...||.:...:.
  Rat   332 FYALATNPEHQQGCRKEIQSLLGDGASITWDDLDKMPYTTMCIKEALRIYPPVTAVSRMLSTPVT 396

  Fly   378 V--GKLTVPKGASISCLIYMLHRDPKNFPDPERFDPDRFLVNEKQMHPFAFAAFSAGPRNCIGQK 440
            .  |: ::|||.::....|.||.:|..:|:||.|||.|| ..|...|..:|..||.|.|||||::
  Rat   397 FPDGR-SLPKGITVMLSFYGLHHNPTVWPNPEVFDPYRF-APESSRHSHSFLPFSGGARNCIGKQ 459

  Fly   441 FAMLELKTSLAMLLRSYRFLPDKDHQPKPLAELVTKSGNGIRLRI 485
            |||.|||.::|:.|..:..|||....|.|:..||.||.|||.||:
  Rat   460 FAMNELKVAVALTLLRFELLPDPTRIPIPIPRLVLKSKNGIYLRL 504

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4s3NP_573003.2 CYP4 64..483 CDD:410721 159/431 (37%)
Cyp4a8NP_113793.2 CYP4B-like 70..503 CDD:410771 159/432 (37%)

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