DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4s3 and Cyp3a23-3a1

DIOPT Version :10

Sequence 1:NP_573003.2 Gene:Cyp4s3 / 32444 FlyBaseID:FBgn0030615 Length:495 Species:Drosophila melanogaster
Sequence 2:NP_037237.2 Gene:Cyp3a23-3a1 / 25642 RGDID:628626 Length:502 Species:Rattus norvegicus


Alignment Length:543 Identity:143/543 - (26%)
Similarity:244/543 - (44%) Gaps:102/543 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSTLALVAFVLWAAFLRYLPKILNFLRLQRFA---------KTLPGPTIGELIANVKKGEILNWL 56
            :|.|.|..:||.|..|         :.|..|.         :.:|||......     |.:||:.
  Rat     4 LSALTLETWVLLAVVL---------VLLYGFGTRTHGLFKKQGIPGPKPLPFF-----GTVLNYY 54

  Fly    57 K-------ELREKHGPVFRIWFGKDLMVMFTDPEDIKQLLGNN--QLLTKSRNYELLEPWLGKGL 112
            .       |..:|:|.::.::.|:..:...||.|.||.:|...  .:.|..|::..: ..:||.:
  Rat    55 MGLWKFDVECHKKYGKIWGLFDGQMPLFAITDTEMIKNVLVKECFSVFTNRRDFGPV-GIMGKAI 118

  Fly   113 LTNGGESWHRRRKLLTPGFHFRILSEFKEPMEENCRILVRRLRTKANGESFDIYPYITLFALDAI 177
            ..:..|.|.|.|.||:|.|....|.|....:|:...|||:.|| :..|:...:......:::|.|
  Rat   119 SVSKDEEWKRYRALLSPTFTSGRLKEMFPVIEQYGDILVKYLR-QEKGKPVPVKEVFGAYSMDVI 182

  Fly   178 CETAMGIKKHAQLQSDSEYVQAVQSICRV-------MHKQSFSF----WQRLNV---------FF 222
            ..|:.|:...:.......:|:..:.:.|:       :....|.|    ::.||:         ||
  Rat   183 TSTSFGVNVDSLNNPKDPFVEKAKKLLRIDFFDPLFLSVVLFPFLTPVYEMLNICMFPKDSIEFF 247

  Fly   223 KHTKPGKEREAALKVLHDETNRVIRLRREQLIQERNEWKPEAEQDDVGAKRRLAFLDMLL----- 282
            |                   ..|.|::..:|              |...|.|:.||.:::     
  Rat   248 K-------------------KFVYRMKETRL--------------DSVQKHRVDFLQLMMNAHND 279

  Fly   283 LTQMEGGAELSDTDIREEVDTFMFEGHDTTSSAIAFALSLLSKNPDVQQRAFEEASE-LEGREKE 346
            ....|....|||.:|..:...|:|.|::.|||.::|.|..|:.:||.|::..||... |..:...
  Rat   280 SKDKESHTALSDMEITAQSIIFIFAGYEPTSSTLSFVLHSLATHPDTQKKLQEEIDRALPNKAPP 344

  Fly   347 S------MPYLEAVIKETLRIYPSVPFFSRKVLEDLEVGKLTVPKGASISCLIYMLHRDPKNFPD 405
            :      |.||:.|:.||||:||......|...:|:|:..:.:|||:.:....|.|||||:::|:
  Rat   345 TYDTVMEMEYLDMVLNETLRLYPIGNRLERVCKKDVEINGVFMPKGSVVMIPSYALHRDPQHWPE 409

  Fly   406 PERFDPDRF-LVNEKQMHPFAFAAFSAGPRNCIGQKFAMLELKTSLAMLLRSYRFLPDKDHQ-PK 468
            ||.|.|:|| ..|:..:.|:.:..|..|||||||.:||::.:|.:|..:|:::.|.|.|:.| |.
  Rat   410 PEEFRPERFSKENKGSIDPYVYLPFGNGPRNCIGMRFALMNMKLALTKVLQNFSFQPCKETQIPL 474

  Fly   469 PLA-ELVTKSGNGIRLRILPRDE 490
            .|: :.:.:....|.|:::||||
  Rat   475 KLSRQGLLQPTKPIILKVVPRDE 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4s3NP_573003.2 CYP4 64..483 CDD:410721 121/455 (27%)
Cyp3a23-3a1NP_037237.2 CYP3A 67..491 CDD:410743 122/458 (27%)

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