DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4s3 and Cyp4a2

DIOPT Version :10

Sequence 1:NP_573003.2 Gene:Cyp4s3 / 32444 FlyBaseID:FBgn0030615 Length:495 Species:Drosophila melanogaster
Sequence 2:NP_001038235.1 Gene:Cyp4a2 / 24306 RGDID:2479 Length:504 Species:Rattus norvegicus


Alignment Length:488 Identity:165/488 - (33%)
Similarity:259/488 - (53%) Gaps:29/488 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 VLWAAFLRYLPKILNFLRLQRFAKTLPGPTIGELIANVKKGEILNWLKELREKHGPVFRIWF-GK 73
            ||:.|...||.:......|::|..|......|..:.:.:..::|.|:    ||.......|. |.
  Rat    30 VLFKAVQFYLRRQWLLKALEKFPSTPSHWLWGHNLKDREFQQVLTWV----EKFPGACLQWLSGS 90

  Fly    74 DLMVMFTDPEDIKQLLGNNQLLTKSRNYELLEPWLGKGLLTNGGESWHRRRKLLTPGFHFRILSE 138
            ...|:..||:.:|.:||.:.    .:.|:.|.||:|.|||...|:.|.:.|::|||.||:.||..
  Rat    91 TARVLLYDPDYVKVVLGRSD----PKPYQSLAPWIGYGLLLLNGKKWFQHRRMLTPAFHYDILKP 151

  Fly   139 FKEPMEENCRILVRRL-RTKANGESFDIYPYITLFALDAICETAMGIKKHAQLQSDS-EYVQAVQ 201
            :.:.|.::..|::.:. :........:|:.|::|..||.:.:.|...:...||..:| .|.:||:
  Rat   152 YVKIMADSVSIMLDKWEKLDDQDHPLEIFHYVSLMTLDTVMKCAFSHQGSVQLDVNSRSYTKAVE 216

  Fly   202 SICRVMHKQSFSFWQRLNVFFKHTKPGKEREAALKVLHDETNRVIRLRREQLIQERNEWKPEAEQ 266
            .:..::..:..|.:...::.:..:..|:....|.::.|:.|:.||:.|:.||       :.|.|.
  Rat   217 DLNNLIFFRVRSAFYGNSIIYNMSSDGRLSRRACQIAHEHTDGVIKTRKAQL-------QNEEEL 274

  Fly   267 DDVGAKRRLAFLDMLLLTQMEGGAELSDTDIREEVDTFMFEGHDTTSSAIAFALSLLSKNPDVQQ 331
            .....||.|.|||:||..:||.|..|||.|:|.|||||||||||||:|.|::....|:.:|:.|:
  Rat   275 QKARKKRHLDFLDILLFAKMEDGKSLSDEDLRAEVDTFMFEGHDTTASGISWVFYALATHPEHQE 339

  Fly   332 RAFEEASELEG-------REKESMPYLEAVIKETLRIYPSVPFFSRKVLEDLEV--GKLTVPKGA 387
            |..||...:.|       ...:.|||....|||.||:|..||..||::...:..  |: ::|||.
  Rat   340 RCREEVQSILGDGTSVTWDHLDQMPYTTMCIKEALRLYSPVPSVSRELSSPVTFPDGR-SIPKGI 403

  Fly   388 SISCLIYMLHRDPKNFPDPERFDPDRFLVNEKQMHPFAFAAFSAGPRNCIGQKFAMLELKTSLAM 452
            .::.|||.||.:|..:|:|:.|||.||..:..: |..|:..||.|.|||||::|||.|||.::|:
  Rat   404 RVTILIYGLHHNPSYWPNPKVFDPSRFSPDSPR-HSHAYLPFSGGARNCIGKQFAMNELKVAVAL 467

  Fly   453 LLRSYRFLPDKDHQPKPLAELVTKSGNGIRLRI 485
            .|..:..|||....|.|:..||.||.|||.||:
  Rat   468 TLLRFELLPDPTRIPVPMPRLVLKSKNGIHLRL 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4s3NP_573003.2 CYP4 64..483 CDD:410721 150/430 (35%)
Cyp4a2NP_001038235.1 CYP4B-like 69..499 CDD:410771 154/446 (35%)

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