DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4s3 and Cyp26b1

DIOPT Version :10

Sequence 1:NP_573003.2 Gene:Cyp4s3 / 32444 FlyBaseID:FBgn0030615 Length:495 Species:Drosophila melanogaster
Sequence 2:NP_780684.1 Gene:Cyp26b1 / 232174 MGIID:2176159 Length:512 Species:Mus musculus


Alignment Length:528 Identity:123/528 - (23%)
Similarity:216/528 - (40%) Gaps:102/528 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSTLA--LVAFVLWAAFLRYLPKILNFLRLQRFAKT--------LPGPTIG-ELIANVKKGEILN 54
            ::|||  ||:..|..|..:.|.::       |:|.|        :|..::| .||     ||..:
Mouse    12 LATLAACLVSVTLLLAVSQQLWQL-------RWAATRDKSCKLPIPKGSMGFPLI-----GETGH 64

  Fly    55 WL-------KELREKHGPVFRIWFGKDLMVMFTDPEDIKQ-LLGNNQLLTKS--RNYELLEPWLG 109
            ||       ...|||:|.||:.......::..|..|:::: |||.:||::..  |:..:|   ||
Mouse    65 WLLQGSGFQSSRREKYGNVFKTHLLGRPLIRVTGAENVRKILLGEHQLVSTEWPRSARVL---LG 126

  Fly   110 KGLLTNG-GESWHRRRKLLTPGFHFRILSEFKEPMEENCRILVRRLRT-KANGESFDIYPYITLF 172
            ...:.|. |:....:||:.:..|....|..:...::   .::...||. .:..|:.::|......
Mouse   127 PNTVANSIGDIHRNKRKVFSKIFSHEALESYLPKIQ---LVIQDTLRAWSSQPEAINVYQEAQRL 188

  Fly   173 ALDAICETAMG--IKKHAQLQSDSEYVQAVQSICRVMHKQSFSFWQRLNVFFKHTKPGKEREAAL 235
            .........:|  |.:.........|.|.|:::..:.....||.::|                  
Mouse   189 TFRMAVRVLLGFSIPEEDLGHLFEVYQQFVENVFSLPVDLPFSGYRR------------------ 235

  Fly   236 KVLHDETNRVIRLRREQLIQERNEWKPEAEQDDVGAKRRLAFLDMLLLTQMEGGAELSDTDIREE 300
               ..:..::::...|:.|:|:.:.....:..|.        ||:|:.:..|.|.|::..::::.
Mouse   236 ---GIQARQILQKGLEKAIREKLQCTQGKDYSDA--------LDILIESSKEHGKEMTMQELKDG 289

  Fly   301 VDTFMFEGHDTTSSAIAFALSLLSKNPDVQQRAFEE----------ASELEGREK----ESMPYL 351
            ....:|..:.||:||....:..|.|:|.|.::..||          ....||..:    .|:.||
Mouse   290 TLELIFAAYATTASASTSLIMQLLKHPAVLEKLREELRAQGLLHGGGCPCEGTLRLDTLSSLRYL 354

  Fly   352 EAVIKETLRIYPSVPFFSRKVLEDLEVGKLTVPKGASISCLIYMLHRDPKNFPDPERFDPDRF-- 414
            :.||||.:|::..|....|.||:..|:....:|||.|:...|...|.....|.|...||||||  
Mouse   355 DCVIKEVMRLFTPVSGGYRTVLQTFELDGFQIPKGWSVMYSIRDTHDTAPVFKDVNVFDPDRFSQ 419

  Fly   415 LVNEKQMHPFAFAAFSAGPRNCIGQKFAMLELKTSLAMLLRSYRFLPDKDHQPKPLAELVTKSGN 479
            ..:|.:...|.:..|..|.|.|:|:..|.|.||.....|..:.||            ||.|::..
Mouse   420 ARSEDKDGRFHYLPFGGGVRTCLGKHLAKLFLKVLAVELASTSRF------------ELATRTFP 472

  Fly   480 GIRLRILP 487
              |:.::|
Mouse   473 --RITLVP 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4s3NP_573003.2 CYP4 64..483 CDD:410721 99/441 (22%)
Cyp26b1NP_780684.1 CYP26B1 60..490 CDD:410730 108/468 (23%)

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