DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4s3 and Cyp4a29

DIOPT Version :9

Sequence 1:NP_573003.2 Gene:Cyp4s3 / 32444 FlyBaseID:FBgn0030615 Length:495 Species:Drosophila melanogaster
Sequence 2:NP_001093653.1 Gene:Cyp4a29 / 230639 MGIID:3717143 Length:509 Species:Mus musculus


Alignment Length:514 Identity:175/514 - (34%)
Similarity:265/514 - (51%) Gaps:40/514 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSTLALVAFV------LWAAFLRYLPKIL-----NFLRLQRFAKTL---PGPTIGELIAN---VK 48
            :|.|:.:.|:      |...||..|..:|     ::||.|...:.|   |.|....|..:   .|
Mouse     3 ISALSPIRFLECVSGFLQVIFLIGLLLLLFKAAQHYLRRQWLLRALYQFPSPPSHWLFGHCLQFK 67

  Fly    49 KGEILNWLKELREKHGPVFRIW-FGKDLMVMFTDPEDIKQLLGNNQLLTKSRNYELLEPWLGKGL 112
            ..|.|.|:....||....|..| :|..:.:...||:.:|.:||...  .|:..|..|.||||.||
Mouse    68 VDEELRWILRYLEKFPGAFLHWIWGSHVFIKVCDPDYMKVILGRAD--PKASLYRFLTPWLGHGL 130

  Fly   113 LTNGGESWHRRRKLLTPGFHFRILSEFKEPMEENCRILVRRLRTKANGE-SFDIYPYITLFALDA 176
            ....|:.|.:.|:||||.||:.||..:...|.::.::::.:....|..: :.:|:..|:|..||.
Mouse   131 FFLNGDEWFQHRRLLTPAFHYDILKPYVGIMADSVQVMLEKWEQIACQDITLEIFHPISLMMLDT 195

  Fly   177 ICETAMGIKKHAQLQSDSE-YVQAVQSICRVMHKQSFSFWQRLNVFFKHTKPGKEREAALKVLHD 240
            |.:.|...:...||...|: |:|||..:..::..:..:.:...::.:..|...:...:|.::.|:
Mouse   196 IMKYAFSYQGSVQLDRSSQAYLQAVSDLNNLVTSRMKNVFLHNDIIYNLTSHSRRTNSACQIAHE 260

  Fly   241 ETNRVIRLRREQLIQERNEWKPEAEQDDVGAKRRLAFLDMLLLTQMEGGAELSDTDIREEVDTFM 305
            .|:||::||:.|| |:....|      .:..||.|.|||:|||::|:.|:.|||..:|.|||:.|
Mouse   261 HTDRVVKLRKAQL-QDNKSMK------KLRGKRCLDFLDILLLSRMDDGSSLSDKALRAEVDSLM 318

  Fly   306 FEGHDTTSSAIAFALSLLSKNPDVQQRAFEEASELEG-------REKESMPYLEAVIKETLRIYP 363
            |.||||.:|.|::....|:.:||.|||..||...|.|       .....|||....|||.||:||
Mouse   319 FGGHDTPASGISWVFYALATHPDHQQRCREEVQSLLGDGSPITWDHLHQMPYTTMCIKEALRLYP 383

  Fly   364 SVPFFSRKVLEDLEV--GKLTVPKGASISCLIYMLHRDPKNFPDPERFDPDRFLVNEKQMHPFAF 426
            .:|...||:...:..  |: ::|||.::....|.||.:||.:|:||.|||.||.:|..| |..||
Mouse   384 PIPSVGRKLSTPVTFPDGR-SLPKGITVLLHFYALHHNPKVWPNPEVFDPSRFAMNSVQ-HSHAF 446

  Fly   427 AAFSAGPRNCIGQKFAMLELKTSLAMLLRSYRFLPDKDHQPKPLAELVTKSGNGIRLRI 485
            ..||.|.|||||:..||..||.::|:.|..:..|||....|.|..:||.||.|||.|.:
Mouse   447 LPFSGGSRNCIGKHLAMNVLKVAVALTLLRFELLPDPSRVPIPTQQLVLKSKNGIYLHL 505

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4s3NP_573003.2 p450 35..469 CDD:278495 155/451 (34%)
Cyp4a29NP_001093653.1 p450 52..503 CDD:278495 162/461 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167844968
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3B9GY
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X23
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.650

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