DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4s3 and cyp-13A1

DIOPT Version :10

Sequence 1:NP_573003.2 Gene:Cyp4s3 / 32444 FlyBaseID:FBgn0030615 Length:495 Species:Drosophila melanogaster
Sequence 2:NP_001369869.1 Gene:cyp-13A1 / 188361 WormBaseID:WBGene00011677 Length:519 Species:Caenorhabditis elegans


Alignment Length:547 Identity:121/547 - (22%)
Similarity:222/547 - (40%) Gaps:102/547 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LALVAFVLWAAFLRYLPKILNFLRLQRFAKTLPGPTIGELIANVKKG-----EILNWLKELREKH 63
            :|:.::.:|.         ..|.|.:.....:..|.:|..:.::...     :...|.|    |.
 Worm    14 VAVFSYYIWQ---------WTFWRRRGVVGPMGFPVLGVFLNSLDNNFPFPLQCREWTK----KF 65

  Fly    64 GPVFRIWFGKDLMVMFTDPEDIKQLLGNNQLLTKSRNY--ELLEPWLG-------KGLLTNGGES 119
            |.::....|....::.:|||.:.::     .:|:..|:  ....|..|       ..|....|..
 Worm    66 GKIYGFTEGTLKTLVISDPELVHEV-----FVTQYDNFYGRKRNPIQGDSEKEKRTNLFAAQGFR 125

  Fly   120 WHRRRKLLTPGFHFRILSEFKEPMEENCRILVRRL-RTKANGESFDIYPYITLFALDAICETAMG 183
            |.|.|.:.:|.|....|.:..:.:|::...|:|.: :..|.|:..|:..:...|.||.|...|||
 Worm   126 WKRLRAISSPTFSNSSLRKLYQTVEDSALELLRHIEKQSAGGKQIDMLKFYQEFTLDVIGRIAMG 190

  Fly   184 IKKHAQLQSDSE-YVQAVQSICRVMHKQSF-----------SFWQRL--NVFFKHTKPG---KER 231
                   |:||: :...:..|...:.:.:|           :|...:  .:..|:.|.|   |..
 Worm   191 -------QTDSQMFKNPIMPIVSKLFQGNFAKLFLIGGIFPTFLVEIIRQILLKNLKVGSFRKIN 248

  Fly   232 EAALKVLHDETNRVIRLRREQLIQERNEWKPEAEQDDVGAKRRLAFLDMLLLTQMEG-------- 288
            |..|..:|   ||:             :.:.|.:::.:.......|:|:.|..:.|.        
 Worm   249 EITLDAIH---NRI-------------KQREEDQKNGIEIGEPADFIDLFLDAKAEDVEHFGENN 297

  Fly   289 ----------GAELSDTDIREEVDTFMFEGHDTTSSAIAFALSLLSKNPDVQQRAFEEAS----- 338
                      ..:|:..:|..:...|:..|.|||:.::::|..||:.:|::|::..||.:     
 Worm   298 GDFSKSTTYTNRQLTTEEIVGQCTVFLIAGFDTTALSLSYATYLLATHPEIQKKLQEEVNRECPN 362

  Fly   339 -ELEGREKESMPYLEAVIKETLRIYPSVPFF-SRKVLEDLEVGKLTVPKGASISCLIYMLHRDPK 401
             |:...:...:.|:|.|.||.||:||...|. ||:.:.:.::|.:.|..|..|....:.||.||.
 Worm   363 PEVTIDQLSKLKYMECVFKEALRLYPLGAFANSRRCMRNTKLGNMKVEVGTMIQVDTWTLHTDPN 427

  Fly   402 NF-PDPERFDPDRFLV-NEKQMH-PFAFAAFSAGPRNCIGQKFAMLELKTSLAMLLRSYRF-LPD 462
            .: .|.|.|.|:|:.. |..|:: ...:..|..|||.|||.:.|.:|.|..|..:||.:.| ...
 Worm   428 IWGDDAEDFKPERWQTPNSDQIYQKSGYIPFGLGPRQCIGMRLAYMEEKILLVHILRKFTFETGA 492

  Fly   463 KDHQPKPLAELVTKSGNGIRLRILPRD 489
            |...|..|....|.....:.:.:.||:
 Worm   493 KTEIPLKLIGRATTQPESVWMHLNPRN 519

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4s3NP_573003.2 CYP4 64..483 CDD:410721 110/474 (23%)
cyp-13A1NP_001369869.1 CYP3A-like 64..510 CDD:410678 111/473 (23%)

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