DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4s3 and cyp-13A1

DIOPT Version :9

Sequence 1:NP_573003.2 Gene:Cyp4s3 / 32444 FlyBaseID:FBgn0030615 Length:495 Species:Drosophila melanogaster
Sequence 2:NP_001369869.1 Gene:cyp-13A1 / 188361 WormBaseID:WBGene00011677 Length:519 Species:Caenorhabditis elegans


Alignment Length:547 Identity:121/547 - (22%)
Similarity:222/547 - (40%) Gaps:102/547 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LALVAFVLWAAFLRYLPKILNFLRLQRFAKTLPGPTIGELIANVKKG-----EILNWLKELREKH 63
            :|:.::.:|.         ..|.|.:.....:..|.:|..:.::...     :...|.|    |.
 Worm    14 VAVFSYYIWQ---------WTFWRRRGVVGPMGFPVLGVFLNSLDNNFPFPLQCREWTK----KF 65

  Fly    64 GPVFRIWFGKDLMVMFTDPEDIKQLLGNNQLLTKSRNY--ELLEPWLG-------KGLLTNGGES 119
            |.::....|....::.:|||.:.::     .:|:..|:  ....|..|       ..|....|..
 Worm    66 GKIYGFTEGTLKTLVISDPELVHEV-----FVTQYDNFYGRKRNPIQGDSEKEKRTNLFAAQGFR 125

  Fly   120 WHRRRKLLTPGFHFRILSEFKEPMEENCRILVRRL-RTKANGESFDIYPYITLFALDAICETAMG 183
            |.|.|.:.:|.|....|.:..:.:|::...|:|.: :..|.|:..|:..:...|.||.|...|||
 Worm   126 WKRLRAISSPTFSNSSLRKLYQTVEDSALELLRHIEKQSAGGKQIDMLKFYQEFTLDVIGRIAMG 190

  Fly   184 IKKHAQLQSDSE-YVQAVQSICRVMHKQSF-----------SFWQRL--NVFFKHTKPG---KER 231
                   |:||: :...:..|...:.:.:|           :|...:  .:..|:.|.|   |..
 Worm   191 -------QTDSQMFKNPIMPIVSKLFQGNFAKLFLIGGIFPTFLVEIIRQILLKNLKVGSFRKIN 248

  Fly   232 EAALKVLHDETNRVIRLRREQLIQERNEWKPEAEQDDVGAKRRLAFLDMLLLTQMEG-------- 288
            |..|..:|   ||:             :.:.|.:::.:.......|:|:.|..:.|.        
 Worm   249 EITLDAIH---NRI-------------KQREEDQKNGIEIGEPADFIDLFLDAKAEDVEHFGENN 297

  Fly   289 ----------GAELSDTDIREEVDTFMFEGHDTTSSAIAFALSLLSKNPDVQQRAFEEAS----- 338
                      ..:|:..:|..:...|:..|.|||:.::::|..||:.:|::|::..||.:     
 Worm   298 GDFSKSTTYTNRQLTTEEIVGQCTVFLIAGFDTTALSLSYATYLLATHPEIQKKLQEEVNRECPN 362

  Fly   339 -ELEGREKESMPYLEAVIKETLRIYPSVPFF-SRKVLEDLEVGKLTVPKGASISCLIYMLHRDPK 401
             |:...:...:.|:|.|.||.||:||...|. ||:.:.:.::|.:.|..|..|....:.||.||.
 Worm   363 PEVTIDQLSKLKYMECVFKEALRLYPLGAFANSRRCMRNTKLGNMKVEVGTMIQVDTWTLHTDPN 427

  Fly   402 NF-PDPERFDPDRFLV-NEKQMH-PFAFAAFSAGPRNCIGQKFAMLELKTSLAMLLRSYRF-LPD 462
            .: .|.|.|.|:|:.. |..|:: ...:..|..|||.|||.:.|.:|.|..|..:||.:.| ...
 Worm   428 IWGDDAEDFKPERWQTPNSDQIYQKSGYIPFGLGPRQCIGMRLAYMEEKILLVHILRKFTFETGA 492

  Fly   463 KDHQPKPLAELVTKSGNGIRLRILPRD 489
            |...|..|....|.....:.:.:.||:
 Worm   493 KTEIPLKLIGRATTQPESVWMHLNPRN 519

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4s3NP_573003.2 p450 35..469 CDD:278495 113/494 (23%)
cyp-13A1NP_001369869.1 CYP3A-like 64..510 CDD:410678 111/473 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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