DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4s3 and cyp-13A3

DIOPT Version :10

Sequence 1:NP_573003.2 Gene:Cyp4s3 / 32444 FlyBaseID:FBgn0030615 Length:495 Species:Drosophila melanogaster
Sequence 2:NP_496110.1 Gene:cyp-13A3 / 188359 WormBaseID:WBGene00011675 Length:520 Species:Caenorhabditis elegans


Alignment Length:556 Identity:133/556 - (23%)
Similarity:236/556 - (42%) Gaps:107/556 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSTLALVAFVLWAAFLRYLPKILNFLRLQRFAKTLPGPT------IGELIANVKKGEIL---NWL 56
            ||...|:|..|:.....|...|.:|.    ..|.:.||.      |.....:.:|..||   :|.
 Worm     1 MSLSILIAIALFIGVFTYYLWIWSFW----MRKGIKGPRGLPFFGIINAFQSYEKPWILRLGDWT 61

  Fly    57 KELREKHGPVFRIWFGKDLMVMFTDPEDIKQLLGN--NQLLTKSRNYELLEPWLGK-------GL 112
            ||    :||::....|.:..::.:|||.:.::...  :....:.:|     |..|.       .|
 Worm    62 KE----YGPMYGFTDGVEKTLVVSDPEFVHEVFVKQFDNFYARKQN-----PLQGDPDKDPRIHL 117

  Fly   113 LTNGGESWHRRRKLLTPGFHFRILSEFKEPMEENCRILVRRL-RTKANGESFDIYPYITLFALDA 176
            :|:.|..|.|.|.|.:|.|..:.|.:....:||:...::|.| :..|.|::.||..|...|.:|.
 Worm   118 VTSQGHRWKRLRTLASPTFSNKSLRKIFSTVEESVAEMMRHLEKGTAGGKTIDILEYYQEFTMDI 182

  Fly   177 ICETAMGIKKHAQLQSDSEYVQAVQS-----------ICRVMHKQSFSF-WQRLNVFFKHTKPGK 229
            |.:.|||  :...:..::.::..:::           ||.::......| |     ||......:
 Worm   183 IGKIAMG--QSGSMMFENPWLDKIRAIFNTRGNIIFIICGIVPFTGSIFRW-----FFSKVPTAQ 240

  Fly   230 EREAALKVLHDE-TNRVIRLRREQLIQERNEWKPEAEQDDVGAKRRLAFLDMLLLTQMEGGAELS 293
            ...:.:..|... |.||    .::...|:...:...|..|        |:|:.|..|       :
 Worm   241 TVTSLMHTLEIALTKRV----EQRAADEKAGIESSGEPQD--------FIDLFLDVQ-------A 286

  Fly   294 DTDIREE-------------VD-------------TFMFEGHDTTSSAIAFALSLLSKNPDVQQR 332
            |||..|:             ||             .|:..|:|||:.:::::..||:::|::|::
 Worm   287 DTDFLEDETKNGFARSQIVKVDKHLTFDEIIGQLFVFLLAGYDTTALSLSYSSYLLARHPEIQKK 351

  Fly   333 AFEEAS------ELEGREKESMPYLEAVIKETLRIYPSVPF-FSRKVLEDLEVGKLTVPKGASIS 390
            ..||..      |:...:...:.|:|.|||||||:||.... .:||.::...|..:.:.:|.::.
 Worm   352 LQEEVDRECPDPEVTFDQLSKLKYMECVIKETLRLYPLASIVHNRKCMKSTTVLGMKIEEGTNVQ 416

  Fly   391 CLIYMLHRDPKNF-PDPERFDPDRFLVNEKQ-MHPFAFAAFSAGPRNCIGQKFAMLELKTSLAML 453
            ...:.||.|||.: .:...|.|:|:...::| :...|:..|..|||.|||.:.|.:|.|..||.:
 Worm   417 ADTWTLHYDPKFWGENANEFKPERWESGDEQAVAKGAYLPFGLGPRICIGMRLAYMEEKMLLAQI 481

  Fly   454 LRSYRF-LPDKDHQPKPLAELVTKSGNGIRLRILPR 488
            |:.|.. ...:.|.|..|..:.|.:...:.|::.||
 Worm   482 LKKYSLETTFETHIPLKLVGIATTAPTNVHLKLKPR 517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4s3NP_573003.2 CYP4 64..483 CDD:410721 112/477 (23%)
cyp-13A3NP_496110.1 CYP3A-like 63..509 CDD:410678 113/480 (24%)

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