DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4s3 and cyp-13A3

DIOPT Version :9

Sequence 1:NP_573003.2 Gene:Cyp4s3 / 32444 FlyBaseID:FBgn0030615 Length:495 Species:Drosophila melanogaster
Sequence 2:NP_496110.1 Gene:cyp-13A3 / 188359 WormBaseID:WBGene00011675 Length:520 Species:Caenorhabditis elegans


Alignment Length:556 Identity:133/556 - (23%)
Similarity:236/556 - (42%) Gaps:107/556 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSTLALVAFVLWAAFLRYLPKILNFLRLQRFAKTLPGPT------IGELIANVKKGEIL---NWL 56
            ||...|:|..|:.....|...|.:|.    ..|.:.||.      |.....:.:|..||   :|.
 Worm     1 MSLSILIAIALFIGVFTYYLWIWSFW----MRKGIKGPRGLPFFGIINAFQSYEKPWILRLGDWT 61

  Fly    57 KELREKHGPVFRIWFGKDLMVMFTDPEDIKQLLGN--NQLLTKSRNYELLEPWLGK-------GL 112
            ||    :||::....|.:..::.:|||.:.::...  :....:.:|     |..|.       .|
 Worm    62 KE----YGPMYGFTDGVEKTLVVSDPEFVHEVFVKQFDNFYARKQN-----PLQGDPDKDPRIHL 117

  Fly   113 LTNGGESWHRRRKLLTPGFHFRILSEFKEPMEENCRILVRRL-RTKANGESFDIYPYITLFALDA 176
            :|:.|..|.|.|.|.:|.|..:.|.:....:||:...::|.| :..|.|::.||..|...|.:|.
 Worm   118 VTSQGHRWKRLRTLASPTFSNKSLRKIFSTVEESVAEMMRHLEKGTAGGKTIDILEYYQEFTMDI 182

  Fly   177 ICETAMGIKKHAQLQSDSEYVQAVQS-----------ICRVMHKQSFSF-WQRLNVFFKHTKPGK 229
            |.:.|||  :...:..::.::..:::           ||.::......| |     ||......:
 Worm   183 IGKIAMG--QSGSMMFENPWLDKIRAIFNTRGNIIFIICGIVPFTGSIFRW-----FFSKVPTAQ 240

  Fly   230 EREAALKVLHDE-TNRVIRLRREQLIQERNEWKPEAEQDDVGAKRRLAFLDMLLLTQMEGGAELS 293
            ...:.:..|... |.||    .::...|:...:...|..|        |:|:.|..|       :
 Worm   241 TVTSLMHTLEIALTKRV----EQRAADEKAGIESSGEPQD--------FIDLFLDVQ-------A 286

  Fly   294 DTDIREE-------------VD-------------TFMFEGHDTTSSAIAFALSLLSKNPDVQQR 332
            |||..|:             ||             .|:..|:|||:.:::::..||:::|::|::
 Worm   287 DTDFLEDETKNGFARSQIVKVDKHLTFDEIIGQLFVFLLAGYDTTALSLSYSSYLLARHPEIQKK 351

  Fly   333 AFEEAS------ELEGREKESMPYLEAVIKETLRIYPSVPF-FSRKVLEDLEVGKLTVPKGASIS 390
            ..||..      |:...:...:.|:|.|||||||:||.... .:||.::...|..:.:.:|.::.
 Worm   352 LQEEVDRECPDPEVTFDQLSKLKYMECVIKETLRLYPLASIVHNRKCMKSTTVLGMKIEEGTNVQ 416

  Fly   391 CLIYMLHRDPKNF-PDPERFDPDRFLVNEKQ-MHPFAFAAFSAGPRNCIGQKFAMLELKTSLAML 453
            ...:.||.|||.: .:...|.|:|:...::| :...|:..|..|||.|||.:.|.:|.|..||.:
 Worm   417 ADTWTLHYDPKFWGENANEFKPERWESGDEQAVAKGAYLPFGLGPRICIGMRLAYMEEKMLLAQI 481

  Fly   454 LRSYRF-LPDKDHQPKPLAELVTKSGNGIRLRILPR 488
            |:.|.. ...:.|.|..|..:.|.:...:.|::.||
 Worm   482 LKKYSLETTFETHIPLKLVGIATTAPTNVHLKLKPR 517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4s3NP_573003.2 p450 35..469 CDD:278495 119/501 (24%)
cyp-13A3NP_496110.1 p450 33..512 CDD:278495 121/513 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.